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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kaladp0056s0140.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 403aa MW: 44970.4 Da PI: 6.6408 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0056s0140.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 160.4 | 7.2e-50 | 20 | 144 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
pGfrF+Ptdeel+++yL+kk+eg++ ++ evi+ev+i+++ePwdLp k+v ++++ew+fFs+r +ky++g++++rat sgyWkatgk+++
Kaladp0056s0140.1.p 20 PGFRFSPTDEELISYYLHKKMEGSEKSV-EVIPEVEICRYEPWDLPgKSVIQSDNEWFFFSPRGRKYPNGSQSKRATGSGYWKATGKERN 108
9************************999.99***************777778899*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v+s +++ +g+k+tLvf+ grapkg++t+W+mhey +
Kaladp0056s0140.1.p 109 VKS-SSNFIGTKRTLVFHLGRAPKGQRTEWIMHEYCM 144
***.9999***************************86 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009845 | Biological Process | seed germination |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0033619 | Biological Process | membrane protein proteolysis |
| GO:0048573 | Biological Process | photoperiodism, flowering |
| GO:0071472 | Biological Process | cellular response to salt stress |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005886 | Cellular Component | plasma membrane |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MGDMSWEAQM SLVAASARFP GFRFSPTDEE LISYYLHKKM EGSEKSVEVI PEVEICRYEP 60
WDLPGKSVIQ SDNEWFFFSP RGRKYPNGSQ SKRATGSGYW KATGKERNVK SSSNFIGTKR 120
TLVFHLGRAP KGQRTEWIMH EYCMHGNSQD SLVVCRLRKN TDFRANEGSH QDSASRQRRG 180
LSMTSNNMDQ AGFADAPSHP NGHVVGDGHL VASDGERVDE GSSRKCSSSH DSYSIDQNGD 240
GLVSDRRLPH DVSQPESSSC VKDCNNDDFY AEILNDDIVQ LFDESSLTVT PSLQPFMPNM 300
FDSRTEQLPM IPATSSAAPS QGVAQRRIRF DTAKFDIDEL EMHLNPPPGP QCFVTKLSAG 360
KLRGKYVLPL LIFAALLALY LWYPVSDMKH TACACLCTDP RR*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 2e-44 | 20 | 160 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 2e-44 | 20 | 160 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 2e-44 | 20 | 160 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 2e-44 | 20 | 160 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 2e-44 | 20 | 160 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 2e-44 | 20 | 160 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 2e-44 | 20 | 160 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 2e-44 | 20 | 160 | 22 | 168 | NAC domain-containing protein 19 |
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