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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kaladp0055s0296.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 216aa MW: 24392.3 Da PI: 4.7484 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0055s0296.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.5 | 5.6e-19 | 20 | 72 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +f+++q++ Le+ Fe + ++ ++ +LA++lgL+ rqV +WFqN+Ra++k
Kaladp0055s0296.1.p 20 KSRFSDKQVKLLEAIFEAETKIEPLKKMQLARELGLEPRQVAIWFQNKRARWK 72
578*************************************************9 PP
|
| 2 | HD-ZIP_I/II | 113.5 | 1.3e-36 | 19 | 110 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
k r+s++qvklLE Fe+e+k+ep +K++lareLgl+prqva+WFqn+RAR+k+kqlEk+++aL+++yd+l+ + ++L++e+++L ++l
Kaladp0055s0296.1.p 19 SKSRFSDKQVKLLEAIFEAETKIEPLKKMQLARELGLEPRQVAIWFQNKRARWKSKQLEKEFRALRARYDNLAFQFQSLKEEKQSLFAQL 108
699***********************************************************************************9999 PP
HD-ZIP_I/II 92 ke 93
++
Kaladp0055s0296.1.p 109 EN 110
75 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MSFENGDSGS PPRRRRGESK SRFSDKQVKL LEAIFEAETK IEPLKKMQLA RELGLEPRQV 60
AIWFQNKRAR WKSKQLEKEF RALRARYDNL AFQFQSLKEE KQSLFAQLEN MNLAMGKLGE 120
RGVSTRLSPG EESENGGANC EYVEVIHRPE MCVRPDGVGY GGSGMDYVAA QDYAGNMDEL 180
GDSSQASTDQ EWCGADVDAF ELPCGEALWW ECWNC*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}. |
