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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kaladp0053s0376.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
NAC |
| Protein Properties |
Length: 334aa MW: 38193.1 Da PI: 4.6661 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0053s0376.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 153.6 | 9e-48 | 1 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
+p GfrF+Ptdee+v +yL++k+ + ++++ ++i e+d +k+ePwdLpk + +++e +++++rd+ky++g r+nratk+g+Wkatgkd+
Kaladp0053s0376.1.p 1 MPFGFRFNPTDEEVVIHYLAPKAINCEFSV-SFIGEADFNKCEPWDLPKIENMDNSERFYYCQRDRKYPNGLRTNRATKAGFWKATGKDR 89
689*************************99.89***************5545566799******************************** PP
NAM 91 evlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
e+++ ++el+g++ktLvfy+grap+gekt+Wvm eyrl
Kaladp0053s0376.1.p 90 EIYRGkipRRELIGMRKTLVFYTGRAPRGEKTNWVMYEYRL 130
***988888899***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MPFGFRFNPT DEEVVIHYLA PKAINCEFSV SFIGEADFNK CEPWDLPKIE NMDNSERFYY 60
CQRDRKYPNG LRTNRATKAG FWKATGKDRE IYRGKIPRRE LIGMRKTLVF YTGRAPRGEK 120
TNWVMYEYRL MPQFFTSSMI TPQNEEWVLA RVFYKNDNLG GGATTMHSKP YNDHESTSGS 180
LWIKADQQRL VIREDFESLP PLVDHSTFLL PLPPPPTVVK PLMCPPAPAI DPRQDVDDLL 240
IYADNPVHFY PAYSATLLPP EIFGCEQPKK DHKIDESNNV AIGDAVEINK CQPEPPDYPV 300
ETSSNANQAF DDIDDEFDLP DLGSLPDLSI LWD*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-39 | 1 | 158 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-39 | 1 | 158 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-39 | 1 | 158 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-39 | 1 | 158 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 3ulx_A | 5e-39 | 1 | 157 | 15 | 170 | Stress-induced transcription factor NAC1 |
| 4dul_A | 5e-39 | 1 | 158 | 17 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 5e-39 | 1 | 158 | 17 | 168 | NAC domain-containing protein 19 |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that acts as positive regulator of leaf senescence. Activates NYC1, SGR1, SGR2 and PAO, which are genes involved in chlorophyll catabolic processes. Activates senescence-associated genes, such as RNS1, SAG12 and SAG13. {ECO:0000269|PubMed:27021284}. |
