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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kaladp0048s0907.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
LBD |
| Protein Properties |
Length: 301aa MW: 33580.4 Da PI: 4.9665 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0048s0907.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 124.8 | 4.3e-39 | 10 | 110 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
aCaaCk++rr+C ++C lapyfpa+qpk f+n+h+lFG+sn+lk+lk+l+++++++am+s++y++++r + Pv G++g i++l+ q+++
Kaladp0048s0907.1.p 10 ACAACKYQRRRCLPECQLAPYFPADQPKMFQNAHRLFGVSNILKILKQLDPSQKSEAMRSIIYQSDIRDKYPVAGCFGYIHQLHYQIQRG 99
7***************************************************************************************** PP
DUF260 91 kaelallkeel 101
++el+++++++
Kaladp0048s0907.1.p 100 EEELHAIRSQI 110
*****999875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MTLKGGTSQA CAACKYQRRR CLPECQLAPY FPADQPKMFQ NAHRLFGVSN ILKILKQLDP 60
SQKSEAMRSI IYQSDIRDKY PVAGCFGYIH QLHYQIQRGE EELHAIRSQI ALCKMQQQQQ 120
TMGQNDDDNQ IMQTMQTTGI IGEDEDSTSL LQLGMGPPNN THNNNISSAN NNINNNNTMM 180
FENGGGYVNE QFCWNNNNNL MDFQLAGDVV QQQFAVVVPS SSQEMGAGIN NSSSLVHHFR 240
EMHPFLDAID DRQSFIDSKV AYESSSSEES SDPMKAMDHQ VVESTDLKNA AACFSLTSVN 300
*
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