PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0793.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 321aa    MW: 35761.6 Da    PI: 6.2914
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0793.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.6e-11160218563
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          kr++r   NR +A rs +RK +++ eLe+kv +L++e ++L  ++ +l+     l++e+
  Kaladp0048s0793.1.p 160 KRAKRILANRHSAARSKERKIKYTSELERKVHTLQTEATTLSAQVTMLQSDTNGLTAEN 218
                          9***********************************************99988888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-14156220IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.576158221IPR004827Basic-leucine zipper domain
PfamPF001703.0E-9160218IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-9160214No hitNo description
SuperFamilySSF579597.74E-11160214No hitNo description
CDDcd147031.48E-21161210No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MFGGDRCGGF FPDINCMSIT PARTSNHRRA QSESFLQFPD DLFLDPDLDL FDSPPTIPSP  60
PVGVEVKPEP NPYARQRSLS VDDDFFDNLG LSNTGMMEGE GKQVVLGDAD DDDEGDIKTH  120
RRRHSFSVDG SVFEADSGFD GVKKAMAADK LAQLALIDPK RAKRILANRH SAARSKERKI  180
KYTSELERKV HTLQTEATTL SAQVTMLQSD TNGLTAENKE LKLRLQAMEQ QSHLREALNE  240
ALRNEVHRLK IETGQIPTSN GHTFSSRLPL QYPSQASSHF YGSHQAQQNH PQTQQSRTNT  300
NSNNQIPDRS VQSSFMDYSN *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024040740.11e-88transcription factor VIP1
TrEMBLV4V6M52e-87V4V6M5_9ROSI; Uncharacterized protein
STRINGXP_006434439.14e-88(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.19e-63VIRE2-interacting protein 1