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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kaladp0048s0186.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
NAC |
| Protein Properties |
Length: 351aa MW: 39421.6 Da PI: 7.8906 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0048s0186.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 179.5 | 8.9e-56 | 14 | 140 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFhPtdeel+++yL++k++++++ + +i e+d++k+ePw+Lp+k+k +e+ewyfF+ rdkky+tg r+nrat++gyWkatgkdk
Kaladp0048s0186.1.p 14 LPPGFRFHPTDEELITHYLCNKIADSSFAA-VAIGEADLNKCEPWHLPEKAKMGENEWYFFCLRDKKYPTGLRTNRATEAGYWKATGKDK 102
79*************************999.67***************99999************************************* PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
e+++ +++l+g+kktLvfy+grapkgek++Wvmhe+rle
Kaladp0048s0186.1.p 103 EIFR-GKSLIGMKKTLVFYRGRAPKGEKSNWVMHEFRLE 140
****.999****************************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MDQNMYKSDQ PIDLPPGFRF HPTDEELITH YLCNKIADSS FAAVAIGEAD LNKCEPWHLP 60
EKAKMGENEW YFFCLRDKKY PTGLRTNRAT EAGYWKATGK DKEIFRGKSL IGMKKTLVFY 120
RGRAPKGEKS NWVMHEFRLE GKLSLHNLPH TAKTEWVISR VFEKSCSGRK MHVPGVPSLS 180
SFDDFMTLNL NPQLPPLMDF SQIDTKFKPI PPPNVPCFSS QPAFHRPPQS DFVTITSSFN 240
TNNNSQLLAI SRNQPGPFAQ LGHPNPNPIF IPTSYVPGQD EAVARGYLDS INSNHGWPST 300
HLFQSGRETA AVRASQETGL TYEVNETWRP FEDGSASGVG PVDLPCVRPY *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-51 | 12 | 170 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-51 | 12 | 170 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-51 | 12 | 170 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-51 | 12 | 170 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-51 | 12 | 170 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-51 | 12 | 170 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-51 | 12 | 170 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-51 | 12 | 170 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-51 | 12 | 170 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-51 | 12 | 170 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-51 | 12 | 170 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-51 | 12 | 170 | 18 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-51 | 12 | 170 | 15 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-51 | 12 | 170 | 15 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
