PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Function |

Basic Information? help Back to Top

TF ID

Kaladp0048s0085.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 271aa MW: 30692.7 Da PI: 7.9843

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0085.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	71.2	1.4e-22	81	128	5	52
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++ e +skyF++pi+ AA eL+++lT+ K++CR++G+ RWPhRk+ s+ Kaladp0048s0085.1.p 81 LTWEIISKYFYMPIARAAEELNIGLTLFKKRCRELGVGRWPHRKLMSI 128 78899****************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.404	57	149	IPR003035	RWP-RK domain
Pfam	PF02042	4.8E-19	81	128	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence Send to blast
MDSYHTGRLN SDPLYASLNI IDHHFPDDFH GMDKFGNQQS WARDHRRVPT APERSDRKSS 60 RKMRDNCKSA TESNNSVAEF LTWEIISKYF YMPIARAAEE LNIGLTLFKK RCRELGVGRW 120 PHRKLMSIKS LIKNEMEEGG VNNRAVEKAT IRSAIQELES QRKMMEAMPE VELEAQTKRL 180 RQACFKANYK KRRLMIMSNE ALADSNGSVS SSKDRESTTS SMANVSFSSS SMPGRDVGAL 240 ACGLEESDEL QSLLFDALSP SEWSFLSDFI *

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Swissprot	Q9M9U9	2e-39	RKD1_ARATH; Protein RKD1

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	2e-41	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Kaladp0048s0085.1.p