PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Publication

Basic Information? help Back to Top

TF ID

Kaladp0046s0039.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 175aa MW: 19975.4 Da PI: 6.8793

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0046s0039.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49	1.3e-15	66	121	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r+rr+++NRe+ArrsR RK+ ++eL v L +eN++L e+l+++++++++ v Kaladp0046s0039.1.p 66 RRQRRMISNRESARRSRMRKQRHLDELWSQVMRLRNENHSLM---ERLNNMCESHDKLV 121 79*************************************999...99999999998865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-16	62	126	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.484	64	127	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.7E-13	66	124	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.25E-12	66	116	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.3E-11	66	139	No hit	No description
CDD	cd14702	7.58E-18	67	118	No hit	No description
PROSITE pattern	PS00036	0	69	84	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence Send to blast
MFPGSFSMMQ CNMPSLHFGG FLGSLPSAQI LPPLQEFALQ PQYSLSNNST SDEADDQQQH 60 SVIDERRQRR MISNRESARR SRMRKQRHLD ELWSQVMRLR NENHSLMERL NNMCESHDKL 120 VQENAKLKEE TADFRQLLST LQIGSPYNAL QDLAEVPCNT TSTHSITSSI GMPH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	85	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269\|PubMed:26973252}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027095835.1	2e-67	basic leucine zipper 43-like
Swissprot	Q9FMC2	1e-36	BZP43_ARATH; Basic leucine zipper 43
TrEMBL	A0A068TW22	3e-66	A0A068TW22_COFCA; Uncharacterized protein
STRING	VIT_01s0010g00930.t01	2e-63	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	1e-48	basic leucine-zipper 42

Link Out ? help Back to Top
Phytozome	Kaladp0046s0039.1.p

Publications ? help Back to Top
Nowak K,Gaj MD Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis. J. Plant Physiol., 2016. 193: p. 119-26 [PMID:26973252] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]