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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Kaladp0043s0136.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
NAC |
| Protein Properties |
Length: 362aa MW: 40135.3 Da PI: 8.2826 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0043s0136.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 169 | 1.6e-52 | 5 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
+ pGfrFhPtdeelv +yLk+kv++++l++ + ik +diyk++PwdLp k++++ekewyfF++rd+ky++++r+nr+t g+Wkatg+d+
Kaladp0043s0136.1.p 5 MLPGFRFHPTDEELVGFYLKRKVQHRPLPV-DLIKPLDIYKHDPWDLP-KMASREKEWYFFCPRDRKYRNSTRPNRVTGGGFWKATGTDR 92
579***************************.99***************.778899*********************************** PP
NAM 91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++s+ g+ +glkk+Lvfykgra kg+ktdW+mhe+rl
Kaladp0043s0136.1.p 93 PIYSSegPGKCIGLKKSLVFYKGRAAKGTKTDWMMHEFRL 132
****9766778***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MEDTMLPGFR FHPTDEELVG FYLKRKVQHR PLPVDLIKPL DIYKHDPWDL PKMASREKEW 60
YFFCPRDRKY RNSTRPNRVT GGGFWKATGT DRPIYSSEGP GKCIGLKKSL VFYKGRAAKG 120
TKTDWMMHEF RLPSADDQPM LPSKRFMDRS IPANDAWAIC RIFKKTSATA VRAATQGWAC 180
CSAFQLAAPE DDARDSGFIS GNISFAPPKS HPVQTSSFSP NVMIQIDNDP HFNLTSYKPG 240
NALTQKPPGA TNWGASHHHP PPSSLIHAAA TARLCDSQGP QSITRISPAS SQPVISDYEA 300
YFDDQLGIDL SAEDGNSFDL PLNLSDAWRS LGPDSSLCPT ADISATVRRI RMDQSESLGN 360
V*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-50 | 7 | 168 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-50 | 7 | 168 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-50 | 7 | 168 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-50 | 7 | 168 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 4e-50 | 7 | 168 | 19 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 4e-50 | 7 | 168 | 19 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |
