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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0157.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | CAMTA | ||||||||
Protein Properties | Length: 917aa MW: 102063 Da PI: 6.0365 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 148.7 | 1.5e-46 | 12 | 127 | 3 | 117 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 +e + rwlk+ e++ i++n e +l ++++++p+sg+++Lyn++++r+fr DG++w+kk+dg+tv E+he+LKv++ve+l+cyYa++een Kaladp0040s0157.3.p 12 REaEVRWLKPAEVYYIIQNCEDRHLRSKSAKKPPSGTFFLYNKRVLRNFRGDGHNWRKKRDGRTVGEAHERLKVDNVEALNCYYARGEEN 101 55589*****************999***************************************************************** PP CG-1 92 ptfqrrcywlLeeelekivlvhylev 117 ++f+rr++w+L e+++ivlv+yl+v Kaladp0040s0157.3.p 102 SSFRRRSFWMLSGERSHIVLVQYLDV 127 ***********************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 63.325 | 7 | 133 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 3.9E-52 | 10 | 128 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 1.1E-40 | 14 | 127 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 1.9E-11 | 365 | 453 | IPR013783 | Immunoglobulin-like fold |
Pfam | PF01833 | 3.5E-8 | 367 | 450 | IPR002909 | IPT domain |
SuperFamily | SSF81296 | 4.34E-18 | 367 | 451 | IPR014756 | Immunoglobulin E-set |
Gene3D | G3DSA:1.25.40.20 | 1.7E-15 | 566 | 661 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 14.318 | 567 | 659 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 1.87E-16 | 571 | 661 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 3.93E-15 | 572 | 659 | No hit | No description |
Pfam | PF12796 | 7.9E-8 | 587 | 660 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 0.0014 | 600 | 635 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 9.938 | 600 | 632 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 2700 | 639 | 668 | IPR002110 | Ankyrin repeat |
SuperFamily | SSF52540 | 4.51E-8 | 715 | 822 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 11 | 717 | 739 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.895 | 718 | 747 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.12 | 773 | 795 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.608 | 774 | 803 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.007 | 776 | 794 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.0014 | 796 | 818 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.974 | 798 | 823 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 7.3E-5 | 799 | 818 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 917 aa Download sequence Send to blast |
MQSEFDINEL VREAEVRWLK PAEVYYIIQN CEDRHLRSKS AKKPPSGTFF LYNKRVLRNF 60 RGDGHNWRKK RDGRTVGEAH ERLKVDNVEA LNCYYARGEE NSSFRRRSFW MLSGERSHIV 120 LVQYLDVANQ SPGSVSQPSF LLSPPSSLSP GISSATNQEF VSVSGGYDSN INLPSPVSAE 180 IGFEVGISNY MVEVNQASGH LEKQLSLNYE NLNGINSLSS PEGMLNSSNF EGYGMEIADQ 240 VWLDSLLDGS DYAACDGGYA GLQNGFNSLL HEAGDSGMGR QQTSGRDEDC VSWTDVENFG 300 EDEQISLELH EMFPLNTDRF EGPPFSSFTS SQQRNLGYQG KYFETDQTLI QPQANSNLFI 360 DQNQKFTIRD VSPEWGYSFE TTKVIIVGSF LCHPSEHVWT CMFGDIEVPV EIIQEGVILC 420 EAPPNPSGKL TLCVTSGNRE TCSEVREFEY RNKTGICAQC SASKKETTMS SEELLLLVRL 480 AQMLLCDYSL GQRGGDSKEL GNGLSEKRNS DEDSWSLILE SLLVGSGTFA GTLYWLLEEF 540 LKEKLVRWIS SKTQEPTGES TCLLSRKEQG IIHMIAGLGY EWALAPILSS GVGINFRDIN 600 GWTALHWAAR FGREKMVACL IASGALAGAL TDPNVQDPTG KTAASIAAIN GHKGLAGYLS 660 EVALTSHLSS LKLQESELSK ELAVSEAEHT VNCIAEANMN TTEDQLSLND TLTAVRNAAS 720 AAARIQAAFR AHSFRKRQQE KASKTISIDD YGISSDVQVL SAVSKLAFRN TRDHNSAALS 780 IQKKYRGYKG RKEFLDFRQK VVKIQAHVRG HQTRKNYKVC WAAGILEKII LRWLRKGVGL 840 RGFKPELETI DESDEEDFAK VFRKKNVEAA LEEAVARVLS MVASPEARQQ YRRMLERYRQ 900 AKAHLGNAAN ERLQHL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022725126.1 | 0.0 | calmodulin-binding transcription activator 4-like isoform X3 | ||||
Swissprot | Q9FYG2 | 0.0 | CMTA4_ARATH; Calmodulin-binding transcription activator 4 | ||||
TrEMBL | D7TB03 | 0.0 | D7TB03_VITVI; Uncharacterized protein | ||||
STRING | VIT_01s0010g03850.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 0.0 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0040s0157.3.p |
Publications ? help Back to Top | |||
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