PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0084.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 261aa    MW: 28130.1 Da    PI: 5.3563
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0084.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.22.9e-13208253655
                          HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +++Er RR ri +++ +L++l+P+     +k  + a++L +AveY+k+Lq
  Kaladp0040s0084.3.p 208 SIAERVRRTRISDRIRKLQDLVPNM----DKQTNTADMLDEAVEYVKYLQ 253
                          689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.869202252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.95E-16205259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.04E-13206257No hitNo description
Gene3DG3DSA:4.10.280.101.2E-15207258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-10208253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-12208258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042335Biological Processcuticle development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MQPTPGGSSS SSGDGGLSRG RLARFRSAPA SWLEALLEDD DEGEGVDDSL DALKPTETLT  60
QLLSSSNPIT SSPAVSSLRN SCGVDVAGAD PGLFEPSNAA FLRQNSSPAD LFAGGYDGPF  120
SNYSMSSAGY DYLSTPPPTA AKRLRDHPNS QHQHYSATFS AQLKGEQSSG HLQGGVSSYL  180
DLDMDKLLED SVPCRVRAKR GCATHPRSIA ERVRRTRISD RIRKLQDLVP NMDKQTNTAD  240
MLDEAVEYVK YLQKQIQYLV *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00181DAPTransfer from AT1G35460Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018856439.12e-82PREDICTED: transcription factor bHLH80-like isoform X2
SwissprotQ9C8P82e-69BH080_ARATH; Transcription factor bHLH80
TrEMBLA0A2I4HJU93e-81A0A2I4HJU9_JUGRE; transcription factor bHLH80-like isoform X2
STRINGXP_006434680.14e-78(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.13e-59bHLH family protein