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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kaladp0039s0587.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
LBD |
| Protein Properties |
Length: 129aa MW: 13662.8 Da PI: 10.3008 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0039s0587.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 65.7 | 1.1e-20 | 67 | 114 | 1 | 48 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllka 48
+CaaCk+lrr+Ca++Cvlapyfp ++p kf ++h++FGasn++k+l+
Kaladp0039s0587.1.p 67 PCAACKILRRRCADKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQV 114
7********************************************985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 129 aa
Download sequence Send
to blast |
MESIISNGKT TPPALTITPT TFNSFSSSFS SSPSSSSSPP SSHSSPTTAL PPASPLPPQP 60
QVIVMSPCAA CKILRRRCAD KCVLAPYFPP TDPLKFTIAH RVFGASNIIK FLQVPLKSTS 120
HFLSFWAL*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 5e-16 | 66 | 112 | 10 | 56 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 5e-16 | 66 | 112 | 10 | 56 | LOB family transfactor Ramosa2.1 |
