 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Kaladp0038s0031.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 275aa MW: 30550.7 Da PI: 9.3086 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0038s0031.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.1 | 6.3e-18 | 128 | 182 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++k+q Le+ F+ +++++ +++e LA++l+L rqV vWFqNrRa+ k
Kaladp0038s0031.1.p 128 RKKLRLNKHQSALLEDSFKLQSTLNPKQKEALARQLNLRPRQVEVWFQNRRARTK 182
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 118 | 5.1e-38 | 128 | 217 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rl+k+q++lLE+sF+ +++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+eenerL+ke ++L+++
Kaladp0038s0031.1.p 128 RKKLRLNKHQSALLEDSFKLQSTLNPKQKEALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEVLKKCCERLTEENERLHKELKALKQA 217
69*************************************************************************************975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MSPPPLPLDH LIISNKDRGG GLFLGLALRT TAAVATTPPA LDLSLSSSSS GHKPNNIISY 60
DQPSLTLSLL LPAKKFDAQS STGDDEISSF SNNSVSVKRE REEEPDDQLD ASGANIDLFD 120
DVSNTSSRKK LRLNKHQSAL LEDSFKLQST LNPKQKEALA RQLNLRPRQV EVWFQNRRAR 180
TKLKQTEVDC EVLKKCCERL TEENERLHKE LKALKQASRQ QQPFYMRLPP TMCPSCDTLT 240
DAPSSKNSLP NMLTSSKKRM IFNPFVTKQP SAAC*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 126 | 132 | SRKKLRL |
| 2 | 176 | 184 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
