PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0035s0085.6.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 439aa MW: 48798.5 Da PI: 5.7721 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.1 | 4.8e-11 | 255 | 298 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 n+ Er+RR + +++ L++llP++ K++ a+i+ +A++YIk+L Kaladp0035s0085.6.p 255 NATERKRRVEFSGKYDALKSLLPSP-----NKPDRASIVGEAIDYIKEL 298 99**********************8.....6****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.516 | 249 | 298 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.31E-12 | 254 | 314 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.7E-11 | 255 | 304 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.6E-11 | 255 | 310 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.68E-11 | 255 | 303 | No hit | No description |
Pfam | PF00010 | 1.5E-8 | 255 | 298 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0048658 | Biological Process | anther wall tapetum development | ||||
GO:0052543 | Biological Process | callose deposition in cell wall | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 439 aa Download sequence Send to blast |
MAASKDTSSF DATSVPEEGL HVANMMASST TNSFEENMKF PGEEFSHSSH KLGFGIMDNH 60 YYASNSSADN LMQEVLCDSN QDPAGDQMSW NAHGVNEMQN GHRGFHVPNL QDHPYPATHE 120 LLDLFNLPRC SASSFVPNSL ISFSNPVHKV SNFNSSLGFL GDHTQPENMP ASANLYDPLY 180 QMSPPPQQPS IRELIQSTLP RCCNFSGLNG SLYGGEDERD VVGGAYQDLE GRDFDSEVLE 240 FTGEKPRKGK GKEGNATERK RRVEFSGKYD ALKSLLPSPN KPDRASIVGE AIDYIKELKR 300 TVSELKSLVE KKKCGKERNK KPKTEEDGFG DYNGSLRCSW LQRKSKDAEV DVRIIDDEVT 360 IKLVQRKRIN CLLLVTKILD ELQLDLQHVA GGHAGDFYSF LFNTKIYEGS YVYATGIANR 420 LLEAVERQYA AVPPSSKY* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021663258.1 | 1e-129 | transcription factor bHLH91-like | ||||
TrEMBL | A0A2I4F185 | 1e-126 | A0A2I4F185_JUGRE; transcription factor bHLH91-like isoform X2 | ||||
STRING | cassava4.1_028473m | 1e-122 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 4e-76 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0035s0085.6.p |