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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0035s0054.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | CAMTA | ||||||||
Protein Properties | Length: 1054aa MW: 117731 Da PI: 5.6036 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 180 | 2.9e-56 | 21 | 137 | 2 | 118 |
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 l+ ++rwl++ ei++iL+n++++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+e+n Kaladp0035s0054.4.p 21 LEAQHRWLRPAEICEILQNYKSFRICPEPADQPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEDN 110 5679************************************************************************************** PP CG-1 92 ptfqrrcywlLeeelekivlvhylevk 118 ++fqrr+yw+Lee+l++ivlvhy++vk Kaladp0035s0054.4.p 111 ENFQRRSYWMLEEALSHIVLVHYRDVK 137 ************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 82.901 | 16 | 142 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 1.5E-79 | 19 | 137 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 1.0E-49 | 22 | 136 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 5.3E-5 | 467 | 555 | IPR013783 | Immunoglobulin-like fold |
Pfam | PF01833 | 1.6E-5 | 468 | 553 | IPR002909 | IPT domain |
SuperFamily | SSF81296 | 3.73E-17 | 468 | 554 | IPR014756 | Immunoglobulin E-set |
CDD | cd00204 | 2.23E-14 | 652 | 756 | No hit | No description |
Gene3D | G3DSA:1.25.40.20 | 4.2E-19 | 652 | 765 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 2.49E-18 | 656 | 763 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 18.324 | 659 | 772 | IPR020683 | Ankyrin repeat-containing domain |
Pfam | PF12796 | 1.5E-8 | 673 | 763 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 0.066 | 701 | 730 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 9.591 | 701 | 733 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 250 | 740 | 769 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 15 | 873 | 895 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.309 | 876 | 903 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.0035 | 876 | 894 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 1.27E-5 | 876 | 924 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 0.029 | 896 | 918 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.498 | 897 | 921 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 6.5E-4 | 899 | 917 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1054 aa Download sequence Send to blast |
MDSSSRRHVL GNQLDIEQIL LEAQHRWLRP AEICEILQNY KSFRICPEPA DQPPSGSLFL 60 FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL HCYYAHGEDN ENFQRRSYWM 120 LEEALSHIVL VHYRDVKGNR TSISRTRENV ESSITVQEAG DNLSESEISN SASSNMQRSS 180 YQNPSPTTDT SLSSMHASQY EDAESAYNDQ NMCGLHSFLE MRQPANGNLV GPSNTYYTIS 240 SLVYEPQKQN DFPSWEDVLK NCAAENPYMT LGSSRLSAKP DNMGIIFKHE SNMFGHFVTD 300 GFSNKLDIAS DIQGQTEWRY HQASDGSSSD LSKWPLDTKF NSNFDRQDIG SLNLLGSMES 360 SHSQLNEGDG PPKSEPHVPT LDSGLYSDGK GVMKPLHEDG LRKLDSFNRW MSKELGDVDE 420 SIVQTGSGAY WSAVESENAI DDSGSSSHGH MDADMVLPSL STDQLFSIID FSPNWAYEDS 480 EIKVLITGKF LRGQNEVEKL KWSCMFGEVE VPAEVIADGV LRCKAPHHKY GRVPFYVTCS 540 NRFACSEVRE FEYREHPVQQ MDDTDAGTEQ EIFLRMRLLN LLSLGLDPPD YDFKVPGDSS 600 NLIVKISELM NEDNGEWDQT LKTKPAEKFS SEKMNDQLIQ KLLKEKLHVW LLHKAAEGGK 660 GANLPDEDGQ GVLHLAAALG YGWAIPPTIL AGVNINFRDV NGWTALHWAA SCGRERTVAS 720 LISLGAAAGA LTDPTPKYTS GRTAADLAAQ NGHKGIAGYL AEAALAAHLQ SLDLKDPVAG 780 DVVDELGAKA VQAVAVRDAN PISDSHIPET VSLRYSIAAV CNATQAAARI TQVFRAQSFQ 840 RKQIQEYEED EHSSHGAALS QIALKQQNAF YGGPVAAATR IQKNYRSYKG RKEFLIIRQR 900 IVKLQAHVRG HQVRKNYGKI IWSVGIVEKV IMRWRRKGSG LRGYKPKGQI EGATSNTSSS 960 TEDDFDFLKE GRKQTEDRLQ KALARVKSMV QYPEARDQYR RLLNVVSEIQ ETKGVYDQAH 1020 TQPDEMADSD DDLIDLEALL EADDMDTLTM AEF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2cxk_A | 1e-13 | 468 | 557 | 9 | 92 | calmodulin binding transcription activator 1 |
2cxk_B | 1e-13 | 468 | 557 | 9 | 92 | calmodulin binding transcription activator 1 |
2cxk_C | 1e-13 | 468 | 557 | 9 | 92 | calmodulin binding transcription activator 1 |
2cxk_D | 1e-13 | 468 | 557 | 9 | 92 | calmodulin binding transcription activator 1 |
2cxk_E | 1e-13 | 468 | 557 | 9 | 92 | calmodulin binding transcription activator 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3'. Binds calmodulin in a calcium-dependent manner in vitro (PubMed:12218065). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance in association with CAMTA1 and CAMTA2 (PubMed:23581962). Required for the cold-induced expression of DREB1B/CBF1, DREB1C/CBF2, ZAT12 and GOLS3 (PubMed:19270186). Involved in response to cold. Contributes together with CAMTA5 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). Involved together with CAMTA2 and CAMTA4 in the positive regulation of a general stress response (GSR) (PubMed:25039701). Involved in the regulation of GSR amplitude downstream of MEKK1 (PubMed:25157030). Involved in the regulation of a set of genes involved in defense responses against pathogens (PubMed:18298954). Involved in the regulation of both basal resistance and systemic acquired resistance (SAR) (PubMed:21900483). Acts as negative regulator of plant immunity (PubMed:19122675, PubMed:21900483, PubMed:22345509, PubMed:28407487). Binds to the promoter of the defense-related gene EDS1 and represses its expression (PubMed:19122675). Binds to the promoter of the defense-related gene NDR1 and represses its expression (PubMed:22345509). Involved in defense against insects (PubMed:23072934, PubMed:22371088). Required for tolerance to the generalist herbivore Trichoplusia ni, and contributes to the positive regulation of genes associated with glucosinolate metabolism (PubMed:23072934). Required for tolerance to Bradysia impatiens larvae. Mediates herbivore-induced wound response (PubMed:22371088). Required for wound-induced jasmonate accumulation (PubMed:23072934, PubMed:22371088). Involved in the regulation of ethylene-induced senescence by binding to the promoter of the senescence-inducer gene EIN3 and repressing its expression (PubMed:22345509). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:18298954, ECO:0000269|PubMed:19122675, ECO:0000269|PubMed:19270186, ECO:0000269|PubMed:21900483, ECO:0000269|PubMed:22345509, ECO:0000269|PubMed:22371088, ECO:0000269|PubMed:23072934, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25157030, ECO:0000269|PubMed:28351986, ECO:0000269|PubMed:28407487, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene and methyl jasmonate (PubMed:11162426, PubMed:12218065). Induced by infection with the fungal pathogen Golovinomyces cichoracearum (powdery mildew) and the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 (PubMed:22345509). {ECO:0000269|PubMed:11162426, ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:22345509}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010645223.1 | 0.0 | PREDICTED: calmodulin-binding transcription activator 3 isoform X3 | ||||
Swissprot | Q8GSA7 | 0.0 | CMTA3_ARATH; Calmodulin-binding transcription activator 3 | ||||
TrEMBL | A0A2R6RDE6 | 0.0 | A0A2R6RDE6_ACTCH; Calmodulin-binding transcription activator 3 like | ||||
STRING | XP_006428204.1 | 0.0 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22300.2 | 0.0 | signal responsive 1 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0035s0054.4.p |