PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 505aa MW: 55138.4 Da PI: 6.849

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0035s0004.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	110.2	2.3e-34	56	202	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 lp+G++F+Ptd+el+ e+L++kve+ + + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ Kaladp0035s0004.1.p 56 LPAGVKFDPTDQELI-EHLEAKVESINghikshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRK 140 799**********.99**998665554442...144434766646******.555666799**************8 PP NAM 78 ..........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++vl+ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Kaladp0035s0004.1.p 141 iqteccdpqaGGETRWHKTGKTRPVLA-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 202 566666665433778********.999*******5547999999*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-37	52	221	IPR003441	NAC domain
PROSITE profile	PS51005	32.398	56	221	IPR003441	NAC domain
Pfam	PF02365	7.5E-16	57	202	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence Send to blast
MNKQQLSGEG GVGSSSSMIS SSDLLDAKLE GQQLCGSKHC PGCGHKLDGK PDWLGLPAGV 60 KFDPTDQELI EHLEAKVESI NGHIKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS 120 RHFFHRPSKA YTTGTRKRRK IQTECCDPQA GGETRWHKTG KTRPVLANGK QKGCKKILVL 180 YTNFGKNRKP EKTNWVMHQY HLGQHEEEKE GELVVSKIFY QTQPRQCNWV DRTSSVVPVA 240 DGSTTTGVDA AGRRDSGSCS SSKDINVQVI MAPQHQLVDG DQLRDRQVSA AMAAALSSYG 300 AMDMQQHLKT DPLFTGFVPF RKVCDEVGLG EVATSTTTAG DQVQASTSGT CQEHDLVGQQ 360 PHLHHLHHHL SHQQHPQLNA AFHISRPSPP ISTIISPPPP PLHTRATSIL LNHQDPYHSV 420 AGMMMQNESN YHEQQGMRSS ASSLEELIMV CSSNNSGGGA SGAGPGGDIK AESSMSNPQE 480 AEWLKYSSFW SDPDDHHHNN HHDG*

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence Send to blast

MNKQQLSGEG GVGSSSSMIS SSDLLDAKLE GQQLCGSKHC PGCGHKLDGK PDWLGLPAGV  60
KFDPTDQELI EHLEAKVESI NGHIKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS  120
RHFFHRPSKA YTTGTRKRRK IQTECCDPQA GGETRWHKTG KTRPVLANGK QKGCKKILVL  180
YTNFGKNRKP EKTNWVMHQY HLGQHEEEKE GELVVSKIFY QTQPRQCNWV DRTSSVVPVA  240
DGSTTTGVDA AGRRDSGSCS SSKDINVQVI MAPQHQLVDG DQLRDRQVSA AMAAALSSYG  300
AMDMQQHLKT DPLFTGFVPF RKVCDEVGLG EVATSTTTAG DQVQASTSGT CQEHDLVGQQ  360
PHLHHLHHHL SHQQHPQLNA AFHISRPSPP ISTIISPPPP PLHTRATSIL LNHQDPYHSV  420
AGMMMQNESN YHEQQGMRSS ASSLEELIMV CSSNNSGGGA SGAGPGGDIK AESSMSNPQE  480
AEWLKYSSFW SDPDDHHHNN HHDG*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269\|PubMed:25265867, ECO:0000269\|PubMed:25535195}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00460	DAP	Transfer from AT4G29230	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006475352.1	0.0	NAC domain-containing protein 75
Refseq	XP_006475353.1	0.0	NAC domain-containing protein 75
Refseq	XP_024953323.1	0.0	NAC domain-containing protein 75
Swissprot	Q9M0F8	1e-154	NAC75_ARATH; NAC domain-containing protein 75
TrEMBL	A0A067EL13	0.0	A0A067EL13_CITSI; Uncharacterized protein
STRING	XP_006475352.1	0.0	(Citrus sinensis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-132	NAC domain containing protein 75

Link Out ? help Back to Top
Phytozome	Kaladp0035s0004.1.p

Publications ? help Back to Top
Droc G, et al. OryGenesDB: a database for rice reverse genetics. Nucleic Acids Res., 2006. 34(Database issue): p. D736-40 [PMID:16381969] Sakamoto S,Mitsuda N Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant. Plant Cell Physiol., 2015. 56(2): p. 299-310 [PMID:25535195]