PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0284.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 435aa    MW: 47064.1 Da    PI: 4.9246
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0284.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.2e-1298141855
                          HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           Er RR+++++ f +L +l+P++    + K++K+ i+e++v+YI+ L+
  Kaladp0033s0284.1.p  98 TERERRKKMRNMFGTLHSLVPNL----QSKPDKVKIVEETVNYIRTLE 141
                          6*********************9....79****************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.12290140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-1495159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-996146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-1397156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.7E-1098141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.21E-1299145No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MEEDGKLQEE INNMFMCDCG SLSLWGCGDG NEKEMIEVAA ELEEGVNNGE ENKNREQDVE  60
LGKIVMAGGG EGDGEGGGGN DGKREDKTED PFDFRIQTER ERRKKMRNMF GTLHSLVPNL  120
QSKPDKVKIV EETVNYIRTL EQTLQTLQTK KQEKLKETRG SISFNPYSPS SSSMMPPQPH  180
PQPQMVVEPY EAISREALLT EYYLNSSSSS RSITPPNSNA PTPKGHNTTA SNSALGSPPI  240
VMIDTPPNNL SGNICGSPPI VMIDTPPSAS SLKHNPNLSG NICGSPPIVM IDTPPNACSL  300
KPNTNLSGNI WASPPIVMKP NPGPGAGETP AKVTLSPSSV AFQTFTSKNV VLCVCGPEAN  360
FNICGARKPG FYTSICSVLE KYRLEVKSLQ VSSEEHSNLT KVMFQARTTA LLDQYPVEDI  420
YRAAAVEMAH LVSS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-11bHLH family protein