PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kaladp0032s0309.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 392aa MW: 43267.1 Da PI: 7.4835

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0032s0309.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.1	1.1e-39	76	136	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCdstntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ s Kaladp0032s0309.1.p 76 QEEALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTNGGTLRNVPVGGGCRKNKRPS 136 6899******************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.7E-33	78	134	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	6.0E-26	80	129	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.516	80	134	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	82	118	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0048364	Biological Process	root development
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence Send to blast
MPSQLSLYKC HPITPHFLIL HISITLTSST FISSTVLKTQ MMELSSAQHQ EMAAESLENM 60 LICTKAQQER KPRPQQEEAL KCPRCDSTNT KFCYYNNYSL TQPRYFCKSC RRYWTNGGTL 120 RNVPVGGGCR KNKRPSSKRS ANSSSDTHQQ HHHQPHHLLN SSSSDAQNPF SAFSSQMTSG 180 YDEYHHPGNN DLSLVFARLQ KQVSGYDDAQ EHNLSLLGNY TSNHFGNIMG LNSSVSSGCH 240 GFLDGLKTNL LEQTHLQTNN VSNFLYNGFN GSNNNNTSIS NITDQMMIPY EDLSISSCFG 300 TKPAAAAVLK QENQVSDSTS RSSQLLWGAA AAAGFPWHQI NTQSSIGGHD DVIINNNVVD 360 HSVDLVRDNI NVFAAAAAPV WHHGLINSPL M*

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence Send to blast

MPSQLSLYKC HPITPHFLIL HISITLTSST FISSTVLKTQ MMELSSAQHQ EMAAESLENM  60
LICTKAQQER KPRPQQEEAL KCPRCDSTNT KFCYYNNYSL TQPRYFCKSC RRYWTNGGTL  120
RNVPVGGGCR KNKRPSSKRS ANSSSDTHQQ HHHQPHHLLN SSSSDAQNPF SAFSSQMTSG  180
YDEYHHPGNN DLSLVFARLQ KQVSGYDDAQ EHNLSLLGNY TSNHFGNIMG LNSSVSSGCH  240
GFLDGLKTNL LEQTHLQTNN VSNFLYNGFN GSNNNNTSIS NITDQMMIPY EDLSISSCFG  300
TKPAAAAVLK QENQVSDSTS RSSQLLWGAA AAAGFPWHQI NTQSSIGGHD DVIINNNVVD  360
HSVDLVRDNI NVFAAAAAPV WHHGLINSPL M*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	4e-32	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Kaladp0032s0309.1.p