PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0031s0137.3.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 739aa    MW: 81770 Da    PI: 7.3405
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0031s0137.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.8e-085698347
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +WT +E+e +  a +q+G++ +++I  +++  +   q++++++ +
  Kaladp0031s0137.3.p 56 AWTRQEEESFFTALRQFGKN-FEKITLRVQ-SKNKDQVRHYYYRL 98
                         6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.35E-1042103IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.5E-550101IPR009057Homeodomain-like
PROSITE profilePS5129314.7352103IPR017884SANT domain
SMARTSM007173.1E-653101IPR001005SANT/Myb domain
CDDcd001672.99E-65699No hitNo description
PfamPF002494.7E-65698IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    Send to blast
MMTELQTTMT TSLDCGPNFL TLNCSLKDGI PGTCFSSIDH VETKHSAKKP TRQWAAWTRQ  60
EEESFFTALR QFGKNFEKIT LRVQSKNKDQ VRHYYYRLFR RMNKLLGPGI SLDSKNSKET  120
IAAMLRWWSL LEKYSCKASK LHLKPRRFKL FVEALEHQLV KDRKKSIKKK HSQGENCAPA  180
ASIPVGNQTR SLGTDSDTVK LVLIDSQNIQ KLGSGKVTSS SPRCNVSLGV NRGNIKGDTS  240
SVKMARQRKR PGSASATSYK RWEKAAMAGV SLVADAAEHL ERAGLRQDSE QELGTNSFDH  300
PGNLLPPLPH HQNAIHESNV QSSVKLKLQL FPIDEVTRRA LEMDKLNPYL ELTLSNRKKI  360
SSVLEHLTRK WGSSSVATGK LMLFPYMAKR ENLVSYQRWG QDSCVSVGDI NISIGNPAVF  420
RLRYGWVSPE TDCPSNQVCF SSDHAMNMTG QSHHASPDVQ NNHGMTSNPA ENTKLRTENV  480
HASAESLKVG STVAVSAGEW ADSLTNMSIG DLLTEVSDEI NDNAIEPPVS GNTEYYEQIP  540
FTCDSFDAAI AAHISKHHNK TSFPSAFTSQ SPSFFEAEDT CDAFSFRKKS NTFQDLSNIP  600
ETEAMQDGNL ACAVDSDYST KELCKVDNVA HSPQRLEVAK DLLEHTIIDD AVVAKDINGL  660
TDLYWPDSLG PLDLEIPTCR YHSTDLILSD SLGGLSGLIA SSLDAFQSCT FFGTEKKPGS  720
PAADESHKTA SFPRVQDY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017977556.10.0PREDICTED: TSL-kinase interacting protein 1 isoform X2
SwissprotQ8LJT80.0TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A067K2750.0A0A067K275_JATCU; Uncharacterized protein
STRINGEOY078870.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.20.0TSL-kinase interacting protein 1