PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

Kaladp0028s0039.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 371aa MW: 39712.6 Da PI: 8.5651

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0028s0039.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.2e-39	63	121	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+s Kaladp0028s0039.1.p 63 EQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTS 121 6889****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	7.3E-33	64	120	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-25	66	117	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.506	66	120	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	68	104	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence Send to blast
MLQELLLGGG SSSTTTTSAY SGGEGKALIS NNINGGIIAE VTTTKNPSHD NSNNGSNNNS 60 NLEQNLRCPR CDSSNTKFCY YNNYNLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKT 120 SFTSALPSVS KSTITGKPKA YSSSADLLLK SGLGNYGLQD PQDQSSLHHP HHHPLLWSSS 180 PHQPQASHLL AFLRSTQNLN PSDHSHFMSS SPHQSIDQSG FTALNLLNSQ TPLSGLDYPS 240 IGVCNSMLRN NNQPSTHHQH QQNEVAQQLG GVDPNSRMHE LYQRLKLSTT GNTNSYSGGG 300 GTEDSHAHVL LGNRVVSASS SPTSTRNNAL DSVPVTMGGG SDLGLWNIPA AYSTWTNDHL 360 PATTNGACPF *

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence Send to blast

MLQELLLGGG SSSTTTTSAY SGGEGKALIS NNINGGIIAE VTTTKNPSHD NSNNGSNNNS  60
NLEQNLRCPR CDSSNTKFCY YNNYNLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKT  120
SFTSALPSVS KSTITGKPKA YSSSADLLLK SGLGNYGLQD PQDQSSLHHP HHHPLLWSSS  180
PHQPQASHLL AFLRSTQNLN PSDHSHFMSS SPHQSIDQSG FTALNLLNSQ TPLSGLDYPS  240
IGVCNSMLRN NNQPSTHHQH QQNEVAQQLG GVDPNSRMHE LYQRLKLSTT GNTNSYSGGG  300
GTEDSHAHVL LGNRVVSASS SPTSTRNNAL DSVPVTMGGG SDLGLWNIPA AYSTWTNDHL  360
PATTNGACPF *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-34	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Kaladp0028s0039.1.p