PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0132.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 343aa    MW: 38186.1 Da    PI: 4.6484
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0132.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.56.9e-12141393127
                  NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev...diykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknr.atksgyWk 84 
                           G++++P+de lvv+    k+ ++ +el e i+++     ++  Pw+L      +++a +k ++  sk +k++ +g+  +r a++ g+Wk
  Kaladp0024s0132.1.p  14 IGYKYDPSDELLVVF---SKIINSGMELPEPIRHMfpvIENSKSPWELFGlgdhRLQAASKVLFGLSKPEKRTGKGRMLKRkAASGGTWK 100
                          69*******999944...56666665665566665421335669****633555666666677888888888889998888788899*** PP

                  NAM  85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                          ++   kev ++ ++++vglk++L f +g++ +    +W m e+r
  Kaladp0024s0132.1.p 101 SQRA-KEVEDArSKQVVGLKTVLSFREGDTAS----HWNMYEFR 139
                          9977.55555438889*********9777655....9******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.8512156IPR003441NAC domain
SuperFamilySSF1019419.42E-1613156IPR003441NAC domain
PfamPF023656.2E-714139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MADFVFTAEG LESIGYKYDP SDELLVVFSK IINSGMELPE PIRHMFPVIE NSKSPWELFG  60
LGDHRLQAAS KVLFGLSKPE KRTGKGRMLK RKAASGGTWK SQRAKEVEDA RSKQVVGLKT  120
VLSFREGDTA SHWNMYEFRN TGWKAGDWVV CKFTYTPPKL LSASTIAARG KRLTTASRVP  180
SEEENTDHEE MMIRNPRTET IDHVNLLQDK KNTAVSVSNN VKSEAALKQP QEAQTLTNYT  240
AQPWPGVTIP NPTAEEEEVD GQAQMHSLAE DIIVEATVTT AVVEPSLWVN QIPVPASDFY  300
YPVDLETLEE ATIDQEAAAT LDEGLDLLIW GDEVCWTWSQ LL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.14e-07NAC family protein