PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kaladp0022s0036.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 317aa MW: 34822.6 Da PI: 5.2134

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0022s0036.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.8	3.6e-21	60	114	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k r++Wt eL +rF+ea + L G++ AtP +ilelm+ + Lt+ h++SHLQkYR++ Kaladp0022s0036.1.p 60 KDRVVWTIELNNRFIEAYNLL-GHQGATPCRILELMNDPRLTRFHIASHLQKYRTH 114 68*****************.9*****************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.06E-15	58	117	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.5E-22	59	117	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.5E-19	60	114	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence Send to blast
MYKQRKKLSA IDTDDDADEN SLHAGPPAPA DSTSTSAVRD SDPGRVKGSS SRGAAGLAKK 60 DRVVWTIELN NRFIEAYNLL GHQGATPCRI LELMNDPRLT RFHIASHLQK YRTHLREMRE 120 ELNPRRSKFR YNFNDPNSCS GSHNGSVVRS VAHQPPVDPA ESFTKFLSEM EDEELFALAQ 180 SQNQRIPSLS PASSRLSLGQ DDISSSDLDL ARILDSHEFN NIFSMLHNCV SRDTFSNSYV 240 GLKISNEGEL LLWDNAAAGQ AAGQFLNLEP INLSSTDVTG SPREFSPSGV SCIGIDSPES 300 CLYVGEVLDH LDSNIQ*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	4e-18	response regulator 1

Link Out ? help Back to Top
Phytozome	Kaladp0022s0036.1.p