PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0015s0124.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 448aa MW: 49781.9 Da PI: 5.0357 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.6 | 0.00025 | 272 | 303 | 17 | 54 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 N++f++Lr+++P+a + +Ka++Le+++ +++L Kaladp0015s0124.3.p 272 NERFSTLRSMIPSA---G---ADKASVLEETIMQVQKL 303 99***********9...4...78899999998766666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 0.00121 | 268 | 307 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.9E-5 | 272 | 317 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 8.11E-5 | 272 | 319 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 448 aa Download sequence Send to blast |
MELGTTELVL EDPALIQRVK TSLLEFSKPG CNVNWTFGPY STDSDEDPVC VDAKMNTLQN 60 VQLGAENIKA EDEEMRLDGH SEDSDEELGA GLPDCSSDTS GGNHQSHVYS WHLTDGYFGA 120 DFLGFTNSSD CASQVVESPA DTKISEPRFG SPNAQNCLQE NKCIKPDAHD NGSSDDLHYR 180 KVISTILRKS NQLTGSLGCS ASGYACRSGF RAWKNRGAVT SRRLLDRQRI LKKTLFTIPL 240 MYSKGFIKPE TEQIGKKACD KPNDDVSRIL ENERFSTLRS MIPSAGADKA SVLEETIMQV 300 QKLEARLGEL ESSVGNARED PKWEPSRVPR DDTAEQVSDN SESERKILKQ KRKVYECETA 360 SEVNSSLKVV IMEQEVSIEV TCRCREYLLL DIMDAVNRLK LDAHWVHSAT HEGLFTLKLK 420 SKFRGTGVVP SGRVVKQVIW ESICEEV* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63650.3 | 2e-40 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0015s0124.3.p |