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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Kaladp0011s1172.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
| Family |
TALE |
| Protein Properties |
Length: 370aa MW: 41785 Da PI: 6.7988 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kaladp0011s1172.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 28.2 | 3.1e-09 | 292 | 327 | 20 | 55 |
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55
+k +yps++e+ LA+++gL+ +q+ +WF N+R ++
Kaladp0011s1172.2.p 292 YKWPYPSETEKVALAESTGLDHKQINNWFINQRKRH 327
5679*****************************885 PP
|
| 2 | ELK | 31.1 | 5.3e-11 | 247 | 268 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK +L++KYsgyL+sLkqE+s
Kaladp0011s1172.2.p 247 ELKLHLMKKYSGYLSSLKQELS 268
9*******************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001708 | Biological Process | cell fate specification |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010089 | Biological Process | xylem development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 370 aa
Download sequence Send
to blast |
MLLLSVEIMS SRFPRVFHIS IRSTSANAGP VASPGAGSSS AFRHQYFQSD HHDSGVKREL 60
AVTTSQFLGQ QLHQNPIGII RENGGIERDD DQCPESDDAA AIKAKIMSHP QCSNLLEAYM 120
DCQKVGAPPQ VVAQLVAARE EFEKQQGSSS SSGKDISRDP ELDQFMEAYY DMLLKYREEL 180
TRPLQEAMDF MRRIESQLNM LGASPIRAYN PSDEKSSDGV GSSEEEGDNG GVTDQLPRID 240
PRAEDRELKL HLMKKYSGYL SSLKQELSKK RKKGKLPKEA RQKLLAWWEL HYKWPYPSET 300
EKVALAESTG LDHKQINNWF INQRKRHWKP SEDIQFMVMD GMHHQNASAL YMHGGHYMGP 360
DHCSYRTGP*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 262 | 271 | LKQELSKKRK |
| 2 | 268 | 272 | KKRKK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably binds to the DNA sequence 5'-TGAC-3'. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU240661 | 0.0 | EU240661.1 Kalanchoe x houghtonii knotted-like homeobox protein (KN5) mRNA, complete cds. |
