PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kaladp0011s0864.2.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TALE

Protein Properties

Length: 749aa MW: 79879.4 Da PI: 7.1253

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0864.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31	4.5e-10	420	457	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + Kaladp0011s0864.2.p 420 FEHflHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVR 457 554459******************************88 PP
2	BELL	124.9	3.2e-40	281	352	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kk+kL+s+l+eV++rY+qy++q+++v+ssFe+vag+gsak+YtslAlk+iS++FrcLkdai++qi Kaladp0011s0864.2.p 281 QRQELQMKKTKLISMLDEVEQRYRQYHHQMKIVVSSFEQVAGYGSAKSYTSLALKTISKQFRCLKDAITSQI 352 69*********************************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	4.3E-58	199	350	IPR006563	POX domain
Pfam	PF07526	2.5E-49	205	349	IPR006563	POX domain
PROSITE profile	PS50071	12.325	398	461	IPR001356	Homeobox domain
CDD	cd00086	2.19E-13	401	462	No hit	No description
SMART	SM00389	1.8E-10	401	465	IPR001356	Homeobox domain
SuperFamily	SSF46689	4.71E-17	402	468	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.7E-29	404	467	IPR009057	Homeodomain-like
Pfam	PF05920	1.4E-18	418	457	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence Send to blast
MATYFHGGNS ELQTDGLHTL YLMSPNYISA YNSASSDTSQ QQTPAPHQSM ILLNSALPQA 60 LAPSQIAHAP PPAQSQFLTL PFAQPISADD PSRSGSGFHY NLWSGGGGQA EVSGVATAAG 120 SHPYQIQLDS GGGSSDVFRR PAALSPTTNN QQGLALSLSS HHQPGGGGNG SLYSSRVGGG 180 GGGGGSSSDV LGGGVEESNG VQNFIMGSKY LKAAQELLDE VVNVGKAAAA ATALNDQQVK 240 KELVKIDNNN NTDGDGAAAS NNEAAGGGFS RAAAEPLSVT QRQELQMKKT KLISMLDEVE 300 QRYRQYHHQM KIVVSSFEQV AGYGSAKSYT SLALKTISKQ FRCLKDAITS QIKETSRSLG 360 EEAEENCLGV KGEGSRLRMI DHQLRQQRAL QQLGMMQHNA WRPQRGLPER AVSVLRAWLF 420 EHFLHPYPKD SDKQMLAKQT GLTRSQVSNW FINARVRLWK PMVEEMYLEE VKDHPEQKGC 480 AVKDANNNNS GASTSKSADP SYKQQSSSNN GMQLQEVKVA PRNQNASPAD ISNSTMSTTS 540 PNASSFQAPP GFGLVGASAD MEGLLQYGKG QKKARGGAHE TQDNSPSSIL SMDMEMKAVG 600 EMGFGRQDIT AGKFGAGYGG GGGFGAYHQL GEVGRFNTDH HHHQMNQQAQ AYHHANNGSV 660 VSLTLGLPPG ENLNYFSQSM HGFDRRMEMG GNGVEHGDDF CGINGSGSGG GNSLHLQAAS 720 PHSNIGFQNM DMQNRKRYAA QLLPDFVA*

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence Send to blast

MATYFHGGNS ELQTDGLHTL YLMSPNYISA YNSASSDTSQ QQTPAPHQSM ILLNSALPQA  60
LAPSQIAHAP PPAQSQFLTL PFAQPISADD PSRSGSGFHY NLWSGGGGQA EVSGVATAAG  120
SHPYQIQLDS GGGSSDVFRR PAALSPTTNN QQGLALSLSS HHQPGGGGNG SLYSSRVGGG  180
GGGGGSSSDV LGGGVEESNG VQNFIMGSKY LKAAQELLDE VVNVGKAAAA ATALNDQQVK  240
KELVKIDNNN NTDGDGAAAS NNEAAGGGFS RAAAEPLSVT QRQELQMKKT KLISMLDEVE  300
QRYRQYHHQM KIVVSSFEQV AGYGSAKSYT SLALKTISKQ FRCLKDAITS QIKETSRSLG  360
EEAEENCLGV KGEGSRLRMI DHQLRQQRAL QQLGMMQHNA WRPQRGLPER AVSVLRAWLF  420
EHFLHPYPKD SDKQMLAKQT GLTRSQVSNW FINARVRLWK PMVEEMYLEE VKDHPEQKGC  480
AVKDANNNNS GASTSKSADP SYKQQSSSNN GMQLQEVKVA PRNQNASPAD ISNSTMSTTS  540
PNASSFQAPP GFGLVGASAD MEGLLQYGKG QKKARGGAHE TQDNSPSSIL SMDMEMKAVG  600
EMGFGRQDIT AGKFGAGYGG GGGFGAYHQL GEVGRFNTDH HHHQMNQQAQ AYHHANNGSV  660
VSLTLGLPPG ENLNYFSQSM HGFDRRMEMG GNGVEHGDDF CGINGSGSGG GNSLHLQAAS  720
PHSNIGFQNM DMQNRKRYAA QLLPDFVA*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4xrs_A	1e-17	407	464	1	58	Homeobox protein Meis1
4xrs_B	1e-17	407	464	1	58	Homeobox protein Meis1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012485171.1	0.0	PREDICTED: BEL1-like homeodomain protein 1
Refseq	XP_012485172.1	0.0	PREDICTED: BEL1-like homeodomain protein 1
TrEMBL	A0A0D2Q7Y9	0.0	A0A0D2Q7Y9_GOSRA; Uncharacterized protein
STRING	Gorai.006G115600.1	0.0	(Gossypium raimondii)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.3	2e-93	BEL1-like homeodomain 1

Link Out ? help Back to Top
Phytozome	Kaladp0011s0864.2.p