PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0359.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 449aa    MW: 49228.1 Da    PI: 6.7429
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0359.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.64.5e-31105158255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrW+p+LH +Fv av++LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  Kaladp0011s0359.1.p 105 PRLRWSPDLHMCFVLAVQRLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 158
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-29101159IPR009057Homeodomain-like
PROSITE profilePS512949.904101161IPR017930Myb domain
SuperFamilySSF466891.7E-13103159IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-22105160IPR006447Myb domain, plants
PfamPF002491.9E-7106157IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MASSTEKPTE AAIEIISGDE SYTSSSSRGA KADHSTTYKS SPTVLDLNER AATGGVQEED  60
NGDCDGDDDN EEGNSTSGNN EDRGGREIRS NGMNTVRQYV RSKMPRLRWS PDLHMCFVLA  120
VQRLGGQERA TPKLVLQLMN VKGLSIAHVK SHLQMYRSKK LDESGQVLSH HQNGPYSHGK  180
HHHQMMEIMC RKGVHTSSHP YAHPHFKMDS SRSGTGSLNN HVEFPSFRQS LSSTRNQNWP  240
VGSNRRWSED LGLAPGCAPD HEPRASDVSK HFAGPVRQSH FLEKRWTASG LGLNAAYDWD  300
KKHPSDDHQM MNLSSVLSLS NPQTSSTTWS PTTSPMLTTA CLRFKEAVSD SSPTPNLQLS  360
LGHADETETK PSDDPSQRHA KGSSSSSIID TALSLSLSPA ATTPKPKADN NGDDQDEEEE  420
RIVMKLGNGA SLKWLPARAG NEDEYFRI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A7e-17106160357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-17106160357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-17106160357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-17106160357Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.17e-36G2-like family protein