PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Basic Information? help Back to Top

TF ID

Kaladp0011s0078.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GeBP

Protein Properties

Length: 395aa MW: 42784 Da PI: 9.8026

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0078.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	57.5	3.8e-18	33	92	39	98
DUF573 39 efvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 + vk++++++++k+q veK+rrLKkK+++ ++++ gke++f+++hdq +fe+++kiWg+ Kaladp0011s0078.1.p 33 DLVKSKLQLDFNKNQPVEKLRRLKKKYRNVLARVSLGKEVQFRSPHDQATFEIANKIWGT 92 789*******************************************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	5.3E-16	33	91	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence Send to blast
MGRPLPLPVV PDADDPIRLS LVVPCVVSCL RIDLVKSKLQ LDFNKNQPVE KLRRLKKKYR 60 NVLARVSLGK EVQFRSPHDQ ATFEIANKIW GTPQSSHSSK DQIHQQHQQQ MRGVDVDDDM 120 PPNFNPASAN LNLNVASNFN NFNSSGGYNN HHHHSDLLAA DERKSQPEQQ KAKKRIRVKM 180 EDSWSLMDQK GSAVAALASN LSPAQNPIWQ PVTGLSTPSL VEETVKNKIS PLMYDRYGGS 240 GVGGSGGLGD GIVSPVPLSF ASQRRIGEGD GGDEEGGGGD STGAAMLLAA KAVGKKKRRV 300 GGVTLKEVNG VVGSGAVRGW RQLVTGCEQQ QLTSLSSSRQ SSLSSYHQTS SSSSSSDYRF 360 KFSSARDHAR PECSGLWLTS VENRFGLTEW VGID*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence Send to blast

MGRPLPLPVV PDADDPIRLS LVVPCVVSCL RIDLVKSKLQ LDFNKNQPVE KLRRLKKKYR  60
NVLARVSLGK EVQFRSPHDQ ATFEIANKIW GTPQSSHSSK DQIHQQHQQQ MRGVDVDDDM  120
PPNFNPASAN LNLNVASNFN NFNSSGGYNN HHHHSDLLAA DERKSQPEQQ KAKKRIRVKM  180
EDSWSLMDQK GSAVAALASN LSPAQNPIWQ PVTGLSTPSL VEETVKNKIS PLMYDRYGGS  240
GVGGSGGLGD GIVSPVPLSF ASQRRIGEGD GGDEEGGGGD STGAAMLLAA KAVGKKKRRV  300
GGVTLKEVNG VVGSGAVRGW RQLVTGCEQQ QLTSLSSSRQ SSLSSYHQTS SSSSSSDYRF  360
KFSSARDHAR PECSGLWLTS VENRFGLTEW VGID*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	298	KKKRR
2	294	299	KKKRRV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	8e-24	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Phytozome	Kaladp0011s0078.1.p