PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0010s0097.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 445aa MW: 48851.2 Da PI: 5.9322 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.8 | 1.2e-05 | 331 | 368 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L Kaladp0010s0097.1.p 331 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 368 677888999*******998.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.189 | 319 | 368 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.30E-6 | 329 | 373 | No hit | No description |
SuperFamily | SSF47459 | 1.44E-11 | 329 | 383 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.7E-9 | 333 | 376 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042631 | Biological Process | cellular response to water deprivation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071472 | Biological Process | cellular response to salt stress | ||||
GO:2000214 | Biological Process | regulation of proline metabolic process | ||||
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence Send to blast |
MASSEDFETA GICSGGWWNP GRSLFPPCAA PLSDFMWASS VLNGTVEEEQ AEMKQAAAAA 60 TYSRSDESDD RRSSSAEHLM SSDYTHIFQD VGQKQPHQMA DFGLSDWSQN SLLHDYSPNM 120 SIFKTVVDDQ KNNNRSSHGL YNLDPKVSQL GLLQENIDAS SYAYTSMVQA LMGPDHTDMS 180 YGFGSSFVAS STSFMQQQQE AAAASNWPKS MISPSPKQQL NGGAKRGNIS APFWDDSWMG 240 SDEIRTPESS HPLLVPALFE DHKPNNSASN SFNGRSSSTT PPKPDTKDNI LPHKLAGFTL 300 LGSKRKINPS GEPYKRPRIE TPSSLPTFKV RKEKLGDRIT ALQQLVSPFG KTDTASVLHE 360 AIEYIKFLHD QVSVLRTPYM QNGTPTNQHQ QMQGEAKNAA DEGPKQDLRS RGLCLVPISS 420 TFPVANETTA DFWTPTFGGT MTFR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.1 | 3e-56 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0010s0097.1.p |