PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Kaladp0002s0037.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 297aa MW: 31684.2 Da PI: 9.8888

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0002s0037.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	105.7	2.5e-33	28	83	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC+s+ntkfCyynnysl+qPr++Ck+CrryWt+GG rnvPvGg+ r+n+++ Kaladp0002s0037.1.p 28 EQCPRCHSRNTKFCYYNNYSLTQPRHYCKTCRRYWTQGGVCRNVPVGGAIRRNNRR 83 58**************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	6.2E-29	28	82	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.307	28	82	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-20	29	82	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	30	66	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence Send to blast
MNFNLNQNNN LGAGEVEYLV GHGELLGEQC PRCHSRNTKF CYYNNYSLTQ PRHYCKTCRR 60 YWTQGGVCRN VPVGGAIRRN NRRVRVGPAG NPLNAVVPRA ARRRGRGPNA AAVAAVAGRS 120 LAIAGRNAAV QAEGNRGRII SSAGTNFPSM GMNFPNPIDA RYSAFRRTMA SHCPLPVVAT 180 SASEALNTSN LRLLQEFPAN NNFLNNNVSA GFRNFFPPIP PSISGGSAWQ QESLFTSSSQ 240 NDNMFLWGHD GASGSGSSDG SGSGGGAPAI NDMDITNTTH WTDLPDYSPP PPPSSA*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	1e-28	Dof family protein

Link Out ? help Back to Top
Phytozome	Kaladp0002s0037.1.p