PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV58294.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 394aa    MW: 44209.9 Da    PI: 9.7472
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV58294.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.48e-1876157274
    trihelix   2 WtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 
                 Wt qe++ Liea++ ++er  ++           ++p+W++v ++++++g+ rs++qC++kw+nl +++k+++e e++ +++
  KZV58294.1  76 WTLQETMILIEAKKIDDERRMKRLgdggergklPAEPRWKWVEDYCWKKGCLRSQNQCNDKWDNLMRDFKRVREYERRLAEK 157
                 **************666655543222344555688*****************************************997544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.09768141IPR017877Myb-like domain
PfamPF138373.7E-1274152No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MKHKNNTSRT LVPDLNRIKP KHNSNSPDLE ISGLAAQPLR EKPQEKHKAS LTTRVSHRGN  60
QDFTNNLLRD YRRGNWTLQE TMILIEAKKI DDERRMKRLG DGGERGKLPA EPRWKWVEDY  120
CWKKGCLRSQ NQCNDKWDNL MRDFKRVREY ERRLAEKSVG GNHEEKSYWG MERNERKENN  180
LPPTMLSQTY EALMEVVERK CPRAEAAAAM SSGGAGGSNT HTLLTVVEKS TCHAFGQAAS  240
ALPPSVLVHP IIQAPPMLLS IPPPAQTSAE PPKFPFSQTL PSVDSDTSEY SDSPAKRRKT  300
RASVGGDDGT ILLQEVGSAI SKSATIIAEA MGDSEEREER RHKQVVSLHE RRLQIEESRV  360
ETNKQGINGL VDAINKLANS ILALAASHHK TTSK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV58294.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096762.11e-124trihelix transcription factor ASR3 isoform X1
TrEMBLA0A2G9HYY01e-123A0A2G9HYY0_9LAMI; Transcription factor GT-2
STRINGXP_009614093.11e-110(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA48212236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-73Trihelix family protein