PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV58189.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 334aa    MW: 36725.6 Da    PI: 6.782
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV58189.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.60.000252112491255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ +++  L +++ +      +K + a++L +A+ YI+ Lq
  KZV58189.1 211 RKEKLGDRITALHQIVSPF-----GKTDTASVLSEAIGYIRFLQ 249
                 6677888999999999987.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.096199248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.22E-5209253No hitNo description
SuperFamilySSF474591.7E-10209261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-8213257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MMAGNPSWWS MNGMHPQFSQ FVYGSNISSV SSNPSESDHH PEQDFPVRSW SQLLLGGLSG  60
TEEENRFGGS LFQQQKKLEN WEDQVLNLNP TFTRDCAINL DVKQEVSQAN SCQLFPPQLD  120
YDHFQANNSQ PSNSNWAHQV MPVSSPTSCI TNLSNSLLNF SGGKGSTANT VGKNHRHNQE  180
HSSECNSTGT GGVSKKARVQ QFSSQPALKV RKEKLGDRIT ALHQIVSPFG KTDTASVLSE  240
AIGYIRFLQS QIEALSSPYM RNTSGNSSQH CVQERNCLFH EEPSQESQNR GGLKDLRSRG  300
LCLVPISCTQ HVGNDNIIGA DYWAPPPPSL GGGF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV58189.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080686.11e-134transcription factor bHLH68
SwissprotQ8S3D19e-53BH068_ARATH; Transcription factor bHLH68
TrEMBLA0A2Z7DE920.0A0A2Z7DE92_9LAMI; Basic helix-loop-helix DNA-binding superfamily protein isoform 1
STRINGMigut.I00932.1.p1e-108(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15192247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.14e-55bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Le Hir R, et al.
    AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana.
    Physiol Plant, 2017. 160(3): p. 312-327
    [PMID:28369972]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]