PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV58189.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bHLH | ||||||||
Protein Properties | Length: 334aa MW: 36725.6 Da PI: 6.782 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.6 | 0.00025 | 211 | 249 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +++ + +K + a++L +A+ YI+ Lq KZV58189.1 211 RKEKLGDRITALHQIVSPF-----GKTDTASVLSEAIGYIRFLQ 249 6677888999999999987.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.096 | 199 | 248 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.22E-5 | 209 | 253 | No hit | No description |
SuperFamily | SSF47459 | 1.7E-10 | 209 | 261 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.3E-8 | 213 | 257 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence Send to blast |
MMAGNPSWWS MNGMHPQFSQ FVYGSNISSV SSNPSESDHH PEQDFPVRSW SQLLLGGLSG 60 TEEENRFGGS LFQQQKKLEN WEDQVLNLNP TFTRDCAINL DVKQEVSQAN SCQLFPPQLD 120 YDHFQANNSQ PSNSNWAHQV MPVSSPTSCI TNLSNSLLNF SGGKGSTANT VGKNHRHNQE 180 HSSECNSTGT GGVSKKARVQ QFSSQPALKV RKEKLGDRIT ALHQIVSPFG KTDTASVLSE 240 AIGYIRFLQS QIEALSSPYM RNTSGNSSQH CVQERNCLFH EEPSQESQNR GGLKDLRSRG 300 LCLVPISCTQ HVGNDNIIGA DYWAPPPPSL GGGF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV58189.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011080686.1 | 1e-134 | transcription factor bHLH68 | ||||
Swissprot | Q8S3D1 | 9e-53 | BH068_ARATH; Transcription factor bHLH68 | ||||
TrEMBL | A0A2Z7DE92 | 0.0 | A0A2Z7DE92_9LAMI; Basic helix-loop-helix DNA-binding superfamily protein isoform 1 | ||||
STRING | Migut.I00932.1.p | 1e-108 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1519 | 22 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 4e-55 | bHLH family protein |
Publications ? help Back to Top | |||
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