PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57673.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 340aa    MW: 38232.3 Da    PI: 4.6746
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57673.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.55e-27128188158
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                 l+Dgy+WrKYGqK++ ++++pr+YYrC++    gC +kk v+rs+++p++++++Y+g+H +
  KZV57673.1 128 LNDGYSWRKYGQKVILNTNHPRAYYRCSYLntqGCLAKKLVQRSDDEPSIFQVVYRGKHSC 188
                 58**************************987889*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-27119189IPR003657WRKY domain
PROSITE profilePS5081122.504123187IPR003657WRKY domain
SuperFamilySSF1182901.15E-24126188IPR003657WRKY domain
SMARTSM007749.7E-37128190IPR003657WRKY domain
PfamPF031067.9E-25129188IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MEEVCFRNEN TLMGLKQGRE FVNQLKTQLL QSNSSEKYDF FVEKIESSFD NAIALINSMA  60
LLESGTSSQI IGNTSESPHL HENSPKSEGS DPDYKDQTHK GVSKKRKMTQ KWTEAVRVSS  120
EEGHENHLND GYSWRKYGQK VILNTNHPRA YYRCSYLNTQ GCLAKKLVQR SDDEPSIFQV  180
VYRGKHSCVQ ETMKQNKVNF CAGYREEEGV KQVQMLVFNT DTGPGLKVET EELDVAANFP  240
PFAFPSTPVE SQDSEHTPLL FDLSKDTNFI ESYSTQFISP ETSESCFSLS QGQVNGFVIG  300
NSLSSDSDFA EIVSGATTST FEGLDLSFDT KFLDAFDNFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-18127188768OsWRKY45
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57673.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093555.11e-94probable WRKY transcription factor 41
TrEMBLA0A2G9I9U22e-84A0A2G9I9U2_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55532237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-34WRKY family protein