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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV57673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | WRKY | ||||||||
Protein Properties | Length: 340aa MW: 38232.3 Da PI: 4.6746 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.5 | 5e-27 | 128 | 188 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 l+Dgy+WrKYGqK++ ++++pr+YYrC++ gC +kk v+rs+++p++++++Y+g+H + KZV57673.1 128 LNDGYSWRKYGQKVILNTNHPRAYYRCSYLntqGCLAKKLVQRSDDEPSIFQVVYRGKHSC 188 58**************************987889*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.7E-27 | 119 | 189 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.504 | 123 | 187 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.15E-24 | 126 | 188 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.7E-37 | 128 | 190 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.9E-25 | 129 | 188 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence Send to blast |
MEEVCFRNEN TLMGLKQGRE FVNQLKTQLL QSNSSEKYDF FVEKIESSFD NAIALINSMA 60 LLESGTSSQI IGNTSESPHL HENSPKSEGS DPDYKDQTHK GVSKKRKMTQ KWTEAVRVSS 120 EEGHENHLND GYSWRKYGQK VILNTNHPRA YYRCSYLNTQ GCLAKKLVQR SDDEPSIFQV 180 VYRGKHSCVQ ETMKQNKVNF CAGYREEEGV KQVQMLVFNT DTGPGLKVET EELDVAANFP 240 PFAFPSTPVE SQDSEHTPLL FDLSKDTNFI ESYSTQFISP ETSESCFSLS QGQVNGFVIG 300 NSLSSDSDFA EIVSGATTST FEGLDLSFDT KFLDAFDNFC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 5e-18 | 127 | 188 | 7 | 68 | OsWRKY45 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV57673.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093555.1 | 1e-94 | probable WRKY transcription factor 41 | ||||
TrEMBL | A0A2G9I9U2 | 2e-84 | A0A2G9I9U2_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5553 | 22 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 3e-34 | WRKY family protein |