PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57643.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family BES1
Protein Properties Length: 704aa    MW: 78979.1 Da    PI: 5.8382
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57643.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822133.91.7e-41712101133
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpleeaeaagssas....aspes 92 
                 ggs+r ++++E+E++k+RER+RRa++aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   +  +p+ +++++++s s    ++ +s
  KZV57643.1  71 GGSRRCRPQEEKERTKLRERQRRAVTAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQVARPTAAPSVTVTSLSthmpVQHNS 169
                 6899*****************************************************************943334445544444444433222223333 PP

      DUF822  93 slqsslkssalaspvesysaspksssfpspssldsislasa 133
                 + +++  +   +  +++  + +k +  p +s +d  +++ +
  KZV57643.1 170 PPSLRGMAPGHQNTADHNTSHMKGVFLPTSSPYDVSPAERS 210
                 33344455556666777777788888888888888777644 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.8E-3672202IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514452.69E-177252691IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.2E-192255689IPR013781Glycoside hydrolase, catalytic domain
PfamPF013736.7E-102261678IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-66292306IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-66313331IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-66335356IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060339347IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008422.1E-7418427IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007507.6E-66428450IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-66501520IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-66535551IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-66552563IPR001554Glycoside hydrolase, family 14
PRINTSPR007507.6E-66570593IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.1E-7573583IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007507.6E-66610632IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.1E-7661675IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008422.1E-7676690IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    Send to blast
MQRFAVSEED DEEMGMDVKE EDEDDDDDDD EDKNMGTPSV VGVDVGIVSA SGNKRFMQHH  60
LYQDQPTPQG GGSRRCRPQE EKERTKLRER QRRAVTAKIL AGLRRHGNYN LRVRADINDV  120
IAALAREAGW VVLPDGTTFP SRSQVARPTA APSVTVTSLS THMPVQHNSP PSLRGMAPGH  180
QNTADHNTSH MKGVFLPTSS PYDVSPAERS QTSAIVGDGG DMQTDPLLGG PINTVDNRQV  240
VDIPTKLQEH DFAGTPHVPV YVMLPLGVIN MKCELVDPDG LVKQLKVLKS VNVDGIMVDC  300
WWGVVEAHAP QEYNWNGYKR LFRIVQELKM KLQVLMSFHE CGGNVGDDVC IPLPHWVAEI  360
GRSNPDIFFT DRLGRRNTEC LSWGVDKERV LRGRTALEVY FDFIRSFRVE FDEFFEDGII  420
SMIVIGLGPC GELRYPSTPV KHGWRYPGIG EFQCYDQYLL KSLRKAAELR GHSFWARGPD  480
NTGLYNSQPQ ETGFFCDGGD YDGYYGRFFL SWYSQVLVDH CDRVLSLAKL AFEGTCIATK  540
LSGIHWWYKT ASHAAELTAG FYNSCNRDGY VAIMAMLKRH GATLCFTCSG IGMFDNHVNF  600
SEALADPEGL AWQVLNSAWD GCVAVASENS VPCHDREGYD YLLEKAKPIS DPDGRHFSSF  660
TYLRLSQHLF EPQKFIEFER FVKRMHGNVT TAIFFLNAIS LCIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1uko_A1e-14425768811444Beta-amylase
1uko_B1e-14425768811444Beta-amylase
1uko_C1e-14425768811444Beta-amylase
1uko_D1e-14425768811444Beta-amylase
1ukp_A1e-14425768811444Beta-amylase
1ukp_B1e-14425768811444Beta-amylase
1ukp_C1e-14425768811444Beta-amylase
1ukp_D1e-14425768811444Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57643.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022865795.10.0beta-amylase 7-like isoform X2
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A2G9FW240.0A0A2G9FW24_9LAMI; Beta-amylase
STRINGMigut.N01443.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16072448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]