PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV57040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bHLH | ||||||||
Protein Properties | Length: 303aa MW: 32638.6 Da PI: 5.5156 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.7 | 5.5e-10 | 152 | 196 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P++ K + a++L + +Y+k L KZV57040.1 152 HSIAERLRRERISERIKALQELVPSC-----NKTDRAAMLDEILDYVKFL 196 99***********************8.....6****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.43E-11 | 145 | 201 | No hit | No description |
SuperFamily | SSF47459 | 9.29E-16 | 145 | 206 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.323 | 147 | 196 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.0E-15 | 149 | 207 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.8E-7 | 152 | 196 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.4E-11 | 153 | 202 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence Send to blast |
MTTNPPDGYA ADDFLEQILS IPSYTGLPGA DSGNSSETAT LNHSVSQLGS AAAVGSALHH 60 HTLFPLGLSL DNGHDAVSDS GGFTVKHERE AANNNIGSLY PAFDHLQGHA IRHPVPQAFQ 120 GQLTPSTAVT VPHAPGIKPR VRARRGQATD PHSIAERLRR ERISERIKAL QELVPSCNKT 180 DRAAMLDEIL DYVKFLRLQV KVLSMSRLGG AGAVAQLVTD IPLQSMEGET SEIGSNQHVW 240 EKWSNEETEN EVAKLMEEDV GAAMQFLQSK SLCIMPISLA ALIYPTNQSD DSTLVKPEPP 300 APS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 161 | RLRRER |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV57040.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076653.1 | 1e-179 | transcription factor UNE12 | ||||
Swissprot | O22768 | 1e-82 | UNE12_ARATH; Transcription factor UNE12 | ||||
TrEMBL | A0A2Z7DBG2 | 0.0 | A0A2Z7DBG2_9LAMI; Uncharacterized protein | ||||
STRING | PGSC0003DMT400034840 | 1e-149 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6421 | 19 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.2 | 1e-80 | bHLH family protein |
Publications ? help Back to Top | |||
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