PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV56446.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

EIL

Protein Properties

Length: 1424aa MW: 160417 Da PI: 8.6021

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV56446.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	416.7	2.6e-127	797	1135	1	331
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWke 97 eel+krmwkd+++lkr++er+k +k++a++++k++ s++qarrkkm+raQDgiLkYMlk mevc+++GfvYgiipe+gkpv+gasd++raWWke KZV56446.1 797 EELEKRMWKDRIKLKRIHERQKL---SKQHALEKQKEKSSTDQARRKKMARAQDGILKYMLKLMEVCKVRGFVYGIIPEQGKPVSGASDNIRAWWKE 890 8*****************996...47778************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-- CS EIN3 98 kvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtpp 194 kv+fd+ngpaai+ky+a++l +++ ++ ++ + + l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWPtG+e+ww +lgl+k q p KZV56446.1 891 KVKFDKNGPAAICKYEAECLSRGDGGGC--QNGNPQMVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGEEEWWMRLGLPKGQT-PL 984 *************99999888888..6799999****************************************************98.9 PP ---GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX......XXXXXXXXXXXXXXXXX CS EIN3 195 ykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss......slrkqspkvtlsceqke 282 ykkphdlkk+wkv+vLtavikhmsp+i++ir l r+sk+lqdkm+akes ++l vl++ee+++++ s++ ss + r +++k +++++++ KZV56446.1 985 YKKPHDLKKMWKVGVLTAVIKHMSPDIARIRSLIRRSKCLQDKMTAKESSIWLGVLSREESLIRQPSSDnglSSisetrsKARGNKKKALVDSDSDY 1081 *******************************************************************6653377666555559999999** PP XXX......XXXXXX.XXXXXXXXXX.................XXXXXXXXXXXXXXXXXXXXX......XX CS EIN3 283 dve......gkkeskikhvqavktta.................gfpvvrkrkkkpsesakvsskevsrtcqs 331 dve g + k+v+++++++ + ++ r + KZV56446.1 1082 DVErvddglG--SVSSKDVRKNEAADtepspvhvtsdpvkakeH----------------LAARPQKRKRPK 1135 *8666531..22223444444443443333333333333222................222222333344 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.60.40.150	9.1E-32	40	165	IPR000008	C2 domain
SMART	SM00239	9.2E-16	43	139	IPR000008	C2 domain
Pfam	PF00168	2.8E-20	43	145	IPR000008	C2 domain
SuperFamily	SSF49562	4.84E-32	43	181	IPR000008	C2 domain
CDD	cd08378	3.33E-61	43	168	No hit	No description
PROSITE profile	PS50004	14.378	44	124	IPR000008	C2 domain
Gene3D	G3DSA:2.60.40.150	5.2E-25	175	312	IPR000008	C2 domain
Pfam	PF00168	1.9E-18	204	308	IPR000008	C2 domain
SuperFamily	SSF49562	1.44E-28	204	356	IPR000008	C2 domain
SMART	SM00239	2.6E-10	205	303	IPR000008	C2 domain
CDD	cd04019	2.20E-79	205	354	No hit	No description
PROSITE profile	PS50004	11.833	206	288	IPR000008	C2 domain
Gene3D	G3DSA:2.60.40.150	1.5E-28	363	490	IPR000008	C2 domain
SuperFamily	SSF49562	1.11E-27	365	493	IPR000008	C2 domain
SMART	SM00239	4.6E-15	366	467	IPR000008	C2 domain
CDD	cd08379	1.20E-63	366	487	No hit	No description
Pfam	PF00168	1.2E-23	366	470	IPR000008	C2 domain
PROSITE profile	PS50004	10.101	367	452	IPR000008	C2 domain
Pfam	PF08372	1.9E-73	615	770	IPR013583	Phosphoribosyltransferase C-terminal
Pfam	PF04873	7.7E-121	797	1044	No hit	No description
Gene3D	G3DSA:1.10.3180.10	4.6E-68	922	1052	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamily	SSF116768	4.18E-59	924	1047	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 1424 aa Download sequence Send to blast
MMRGPVPEEF ALKQTAPKIA GSGVITGGDK VICAYDLVEQ MEYLYVRVVK ARELPARDVN 60 GSCDPYVEVK LGNYKGITKH FLKKTNPQWN VVFAFSQDQL QASSVEVVVK DKDFVLDDFI 120 GRVSFDLSDI PRRVPPDSPL APQWYKLEEK RGEKLRKGEI MLAVWKGTQA DEVFPDAWHS 180 DAAAVGSDGV SRIRGKVYLS PRLWYLRVNV IQCQDLLPSD RSRPPEVFVK VTLGNQALKT 240 RISPVKSVNP SWNEDLVLVV AEPFEEPLVF SVEDRVAPNK DEILGKCMIL LNTIPKRPDN 300 KPVSAKWHNL EKHAIVEGER RETKFASKIH LRLSLDGGYH VLDESTYYSS DYRPSSKILW 360 KSSIGLLELG IISATGLSPM KSKDGRGTTD AYCVAKYGPK WVRTRTIIDS VSPKWNEQYT 420 WEVFDPCTVI TIGVFDNGHL QGGKDASIGK VRIRLSTLET ERVYTHSYPL IVLKPGGVKK 480 MGEVQLAVRF SCTSYLNMLT KYSQPLLPKM HYIHPLSVVQ LDILRFQAIQ IVSARLGRAE 540 PTLKKEVIEY MLDVGSHIWS VRKAKANFMR IMNVMGGLAS LAKWFDQISH WKNPLTTVLI 600 HILLVILVFF PELVLPTLFL YLFFIGIWRY RRKPRHPPHM DIRLSHADAV GPDELDEEFD 660 TFPTSRSSDI VRNRYDRLRS IGGRIQTVMG DLAMQGERFE ALLNWRDPRA SALFVAFCLV 720 AAIVLYVTPL QIVALAAGFY LLRHPRLRSK VPPLSTNFFK RLSARSDCML SDIEIDDVRG 780 ADGIEEKDVS DEEIDEEELE KRMWKDRIKL KRIHERQKLS KQHALEKQKE KSSTDQARRK 840 KMARAQDGIL KYMLKLMEVC KVRGFVYGII PEQGKPVSGA SDNIRAWWKE KVKFDKNGPA 900 AICKYEAECL SRGDGGGCQN GNPQMVLQDL QDATLGSLLS SLMQHCDPPQ RKYPLEKGIP 960 PPWWPTGEEE WWMRLGLPKG QTPLYKKPHD LKKMWKVGVL TAVIKHMSPD IARIRSLIRR 1020 SKCLQDKMTA KESSIWLGVL SREESLIRQP SSDNGLSSIS ETRSKARGNK KKALVDSDSD 1080 YDVERVDDGL GSVSSKDVRK NEAADTEPSP VHVTSDPVKA KEHLAARPQK RKRPKLRSPG 1140 NQLAAPSLNK HLVENPADVV MSINHHDIQI SGYMTNEGQT ANDGIAATRP QENNVQGSSC 1200 VVESEANFSC PFPSSNDVPT NHYEPMLLPT PSADLIPHGS HNIQPSQDSR LHSRQEITTL 1260 PEKSHHPPLN QHFHGPGLHH GAQNYIWQVT PRDSTVHHGY LHNPSIVVGS SNLEHLPEAA 1320 FSKMQCGPVD SSFPLSVLPP RNVKDVSGQE FQNMFKAALP HEPDRHVDPQ FASGFNSLPS 1380 EDVSPFSLPF DGTSSLDTID FDFSVDDDAA SNTKFAEWME YFAS

Sequence ? help Back to Top

Protein Sequence Length: 1424 aa Download sequence Send to blast

MMRGPVPEEF ALKQTAPKIA GSGVITGGDK VICAYDLVEQ MEYLYVRVVK ARELPARDVN  60
GSCDPYVEVK LGNYKGITKH FLKKTNPQWN VVFAFSQDQL QASSVEVVVK DKDFVLDDFI  120
GRVSFDLSDI PRRVPPDSPL APQWYKLEEK RGEKLRKGEI MLAVWKGTQA DEVFPDAWHS  180
DAAAVGSDGV SRIRGKVYLS PRLWYLRVNV IQCQDLLPSD RSRPPEVFVK VTLGNQALKT  240
RISPVKSVNP SWNEDLVLVV AEPFEEPLVF SVEDRVAPNK DEILGKCMIL LNTIPKRPDN  300
KPVSAKWHNL EKHAIVEGER RETKFASKIH LRLSLDGGYH VLDESTYYSS DYRPSSKILW  360
KSSIGLLELG IISATGLSPM KSKDGRGTTD AYCVAKYGPK WVRTRTIIDS VSPKWNEQYT  420
WEVFDPCTVI TIGVFDNGHL QGGKDASIGK VRIRLSTLET ERVYTHSYPL IVLKPGGVKK  480
MGEVQLAVRF SCTSYLNMLT KYSQPLLPKM HYIHPLSVVQ LDILRFQAIQ IVSARLGRAE  540
PTLKKEVIEY MLDVGSHIWS VRKAKANFMR IMNVMGGLAS LAKWFDQISH WKNPLTTVLI  600
HILLVILVFF PELVLPTLFL YLFFIGIWRY RRKPRHPPHM DIRLSHADAV GPDELDEEFD  660
TFPTSRSSDI VRNRYDRLRS IGGRIQTVMG DLAMQGERFE ALLNWRDPRA SALFVAFCLV  720
AAIVLYVTPL QIVALAAGFY LLRHPRLRSK VPPLSTNFFK RLSARSDCML SDIEIDDVRG  780
ADGIEEKDVS DEEIDEEELE KRMWKDRIKL KRIHERQKLS KQHALEKQKE KSSTDQARRK  840
KMARAQDGIL KYMLKLMEVC KVRGFVYGII PEQGKPVSGA SDNIRAWWKE KVKFDKNGPA  900
AICKYEAECL SRGDGGGCQN GNPQMVLQDL QDATLGSLLS SLMQHCDPPQ RKYPLEKGIP  960
PPWWPTGEEE WWMRLGLPKG QTPLYKKPHD LKKMWKVGVL TAVIKHMSPD IARIRSLIRR  1020
SKCLQDKMTA KESSIWLGVL SREESLIRQP SSDNGLSSIS ETRSKARGNK KKALVDSDSD  1080
YDVERVDDGL GSVSSKDVRK NEAADTEPSP VHVTSDPVKA KEHLAARPQK RKRPKLRSPG  1140
NQLAAPSLNK HLVENPADVV MSINHHDIQI SGYMTNEGQT ANDGIAATRP QENNVQGSSC  1200
VVESEANFSC PFPSSNDVPT NHYEPMLLPT PSADLIPHGS HNIQPSQDSR LHSRQEITTL  1260
PEKSHHPPLN QHFHGPGLHH GAQNYIWQVT PRDSTVHHGY LHNPSIVVGS SNLEHLPEAA  1320
FSKMQCGPVD SSFPLSVLPP RNVKDVSGQE FQNMFKAALP HEPDRHVDPQ FASGFNSLPS  1380
EDVSPFSLPF DGTSSLDTID FDFSVDDDAA SNTKFAEWME YFAS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wij_A	1e-67	924	1055	9	140	ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	628	634	RYRRKPR
2	1128	1135	QKRKRPKL

Functional Description ? help Back to Top
Source	Description
UniProt	Required for proliferation and differentiation of shoot stem cells in the shoot apical meristem (SAM), thus determining the appropriate balance between the maintenance of shoot stem cells and their differentiation into other aboveground plant parts via the control of subcellular localization and intercellular trafficking of STM in the shoot apex. Prevents intracellular trafficking of STM to the plasma membrane in cells in the peripheral shoot meristem region thus facilitating STM recycling to the nucleus to maintain stem cells. {ECO:0000269\|PubMed:29742441}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV56446.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011080250.1	0.0	FT-interacting protein 1-like
Swissprot	Q9M2R0	0.0	FTIP3_ARATH; FT-interacting protein 3
TrEMBL	A0A2Z7DC98	0.0	A0A2Z7DC98_9LAMI; Uncharacterized protein
STRING	XP_009588959.1	0.0	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	1e-138	ETHYLENE-INSENSITIVE3-like 3

Publications ? help Back to Top
Bayer EM, et al. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Proteomics, 2006. 6(1): p. 301-11 [PMID:16287169] Liu L,Li C,Liang Z,Yu H Characterization of Multiple C2 Domain and Transmembrane Region Proteins in Arabidopsis. Plant Physiol., 2018. 176(3): p. 2119-2132 [PMID:29259105] Liu L, et al. FTIP-Dependent STM Trafficking Regulates Shoot Meristem Development in Arabidopsis. Cell Rep, 2018. 23(6): p. 1879-1890 [PMID:29742441]