PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV56220.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 337aa    MW: 37625.5 Da    PI: 4.5034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV56220.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-102613011055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  KZV56220.1 261 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 301
                 9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-14250317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.358251300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-13256311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-11257306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.1E-8261301IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MESFGAFPDA ESLFHLNSSE FVFSNHVQIQ SSLLAENMAQ MDNSIFFTTD TDFSSVPQES  60
GECSEFDGGF LLDHGCGNLN ANGGGFLHDE SIPFYLMDCE NDNLMVPVFT DETMEEILQS  120
SNAGKIQAML SSDSCQEMQL KRKYETTSNQ VDLYNGYEIQ SHEDKSADKK RSRVSKDQNK  180
RSTSAKKNKK VVAISNDIEE ENIINSSLTN GQSSSSFSSE DDHSNASQDN NAASNSELNN  240
SKGKARANRG SATDPQSLYA RRRRERINER LRILQNLVPN GTKVDISTML EEAVQYVKFL  300
QLQIKLLSSD ELWMYAPIAY NGMNIGLYDK ISPNLLS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV56220.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074590.12e-79transcription factor bHLH85-like
TrEMBLA0A2Z7D9B60.0A0A2Z7D9B6_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-39bHLH family protein