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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KZV56019.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
|
| Family |
MIKC_MADS |
| Protein Properties |
Length: 188aa MW: 21872.8 Da PI: 10.3164 |
| Description |
MIKC_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KZV56019.1 | genome | CNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 99.6 | 1.2e-31 | 25 | 74 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+
KZV56019.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 74
79***********************************************8 PP
|
| 2 | K-box | 113.9 | 1.5e-37 | 92 | 187 | 3 | 98 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98
+s++ s++ea+++++qqe++kL+++i+nLq+ +R+++Ge+L+ L+l+eL++Le+++e+++++iRskKnell+++ie++qk+e +l+++n++Lr+k+
KZV56019.1 92 SSNNGSVAEANTQYYQQEASKLRAQISNLQNHNRNMIGESLGGLTLRELKNLETKVERGISRIRSKKNELLFAEIEYMQKREIDLHHNNQYLRAKV 187
3444449**************************************************************************************997 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SMART | SM00432 | 3.1E-40 | 17 | 76 | IPR002100 | Transcription factor, MADS-box |
| PROSITE profile | PS50066 | 33.095 | 17 | 77 | IPR002100 | Transcription factor, MADS-box |
| CDD | cd00265 | 1.01E-43 | 18 | 94 | No hit | No description |
| PRINTS | PR00404 | 3.3E-33 | 19 | 39 | IPR002100 | Transcription factor, MADS-box |
| SuperFamily | SSF55455 | 4.84E-33 | 19 | 91 | IPR002100 | Transcription factor, MADS-box |
| PROSITE pattern | PS00350 | 0 | 19 | 73 | IPR002100 | Transcription factor, MADS-box |
| Pfam | PF00319 | 7.6E-27 | 26 | 73 | IPR002100 | Transcription factor, MADS-box |
| PRINTS | PR00404 | 3.3E-33 | 39 | 54 | IPR002100 | Transcription factor, MADS-box |
| PRINTS | PR00404 | 3.3E-33 | 54 | 75 | IPR002100 | Transcription factor, MADS-box |
| Pfam | PF01486 | 6.0E-27 | 101 | 187 | IPR002487 | Transcription factor, K-box |
| PROSITE profile | PS51297 | 14.431 | 103 | 188 | IPR002487 | Transcription factor, K-box |
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0090376 | Biological Process | seed trichome differentiation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MEFHNEQARD LSPQRKIARG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA 60
LIVFSNRGRL YEYANNSVKT TIERYKKASS DSSNNGSVAE ANTQYYQQEA SKLRAQISNL 120
QNHNRNMIGE SLGGLTLREL KNLETKVERG ISRIRSKKNE LLFAEIEYMQ KREIDLHHNN 180
QYLRAKVH
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in regulating genes that determines stamen and carpel development in wild-type flowers. {ECO:0000250}. |
