PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV55191.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

bHLH

Protein Properties

Length: 425aa MW: 46798.5 Da PI: 5.8921

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV55191.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.9	1.1e-05	320	357	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L KZV55191.1 320 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 357 677888999*****998.....8**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.087	308	357	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	9.53E-6	318	361	No hit	No description
SuperFamily	SSF47459	1.28E-11	318	371	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.2E-9	322	365	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence Send to blast
MAEEFDHGEV CGGNWWNSPR NLFSSSPCSS ATNETGSFGW RSGHELTLDV KTTRSSDNST 60 GSVSDGSPTI LGDVQKSQQQ PTADNWNQDL HHDTGRSEEN YSQIVQSSGS LNSSMNYRHQ 120 IRGVDCNQID NWNSKNNFCG DFSAHAFKGE NHISFSLQQQ SLASEICQGL STNFPLNLAS 180 YGYTLFDTDS EHPQQTLFDN QEMNYLSAAS FSNELISGFP KVSHMEIKPS VAKQQPANRM 240 QFSNNTPFWR ATAPPDFIPS TPSQGLTPGL NNFPSTSDQK RCKDESKNLA SVTRKSSGNE 300 PALKHARLET PSPLPTFKVR KEKLGDRITA LQQLVSPFGK TDTASVLHEA IEYIKFLHDQ 360 VNVLSTPYLK NETPPLRHQQ DQEGLNKDLS SRGLCLVPIS STFPVAAGNM LQISGLLLSE 420 EASGS

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence Send to blast

MAEEFDHGEV CGGNWWNSPR NLFSSSPCSS ATNETGSFGW RSGHELTLDV KTTRSSDNST  60
GSVSDGSPTI LGDVQKSQQQ PTADNWNQDL HHDTGRSEEN YSQIVQSSGS LNSSMNYRHQ  120
IRGVDCNQID NWNSKNNFCG DFSAHAFKGE NHISFSLQQQ SLASEICQGL STNFPLNLAS  180
YGYTLFDTDS EHPQQTLFDN QEMNYLSAAS FSNELISGFP KVSHMEIKPS VAKQQPANRM  240
QFSNNTPFWR ATAPPDFIPS TPSQGLTPGL NNFPSTSDQK RCKDESKNLA SVTRKSSGNE  300
PALKHARLET PSPLPTFKVR KEKLGDRITA LQQLVSPFGK TDTASVLHEA IEYIKFLHDQ  360
VNVLSTPYLK NETPPLRHQQ DQEGLNKDLS SRGLCLVPIS STFPVAAGNM LQISGLLLSE  420
EASGS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV55191.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011086152.1	1e-129	transcription factor bHLH112
TrEMBL	A0A2Z7DDS8	0.0	A0A2Z7DDS8_9LAMI; Uncharacterized protein
STRING	VIT_00s0274g00070.t01	1e-110	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA860	24	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	1e-45	bHLH family protein