PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV54517.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 379aa    MW: 41448.9 Da    PI: 6.6172
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV54517.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.5e-10223271355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  KZV54517.1 223 SSHSLAERVRRERISERMKLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 271
                 58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.03E-11218275No hitNo description
SuperFamilySSF474595.23E-17218287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16219288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.821220270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-7223271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-10226276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MSSEENMDRG MVMASSEVDP FYGSNWDSIM SVNQGGNLGS SPYFAPNEFN DPHYSAVLEN  60
QILARASHLV HFPSDSNLDD LVPKAPSLES GCFSEMDNSF GNIHSGFAQN NGVVTQRDPR  120
NGSKTSLDHR QNSEHRGLGD SFNGKRKRKV SFGASLKNAE EQHGKDPSED TESPGEHDEM  180
NPKMHTALRG KQGVDQAKSN AVGGEPSTEN YLHMRAKRGQ ATSSHSLAER VRRERISERM  240
KLLQELVPGC NKITGKAVML DEIINYVQSL QHQVEFLSMK LATVNPELNV DIDQILSKTI  300
LNSRGGNANT HGINPGLSPS HPFRGFSLGN INGLPGTIQP FHPLPHTLFD SELRSILQTG  360
SGSNPPGQKG TPPNRSDLF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV54517.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074329.11e-131transcription factor bHLH74
TrEMBLA0A2Z7D6B70.0A0A2Z7D6B7_9LAMI; DNA binding protein
STRINGXP_002510047.11e-107(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52502435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-74bHLH family protein