PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV54517.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bHLH | ||||||||
Protein Properties | Length: 379aa MW: 41448.9 Da PI: 6.6172 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.5 | 1.5e-10 | 223 | 271 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y++sLq KZV54517.1 223 SSHSLAERVRRERISERMKLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 271 58**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.03E-11 | 218 | 275 | No hit | No description |
SuperFamily | SSF47459 | 5.23E-17 | 218 | 287 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-16 | 219 | 288 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.821 | 220 | 270 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.1E-7 | 223 | 271 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.7E-10 | 226 | 276 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009637 | Biological Process | response to blue light | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MSSEENMDRG MVMASSEVDP FYGSNWDSIM SVNQGGNLGS SPYFAPNEFN DPHYSAVLEN 60 QILARASHLV HFPSDSNLDD LVPKAPSLES GCFSEMDNSF GNIHSGFAQN NGVVTQRDPR 120 NGSKTSLDHR QNSEHRGLGD SFNGKRKRKV SFGASLKNAE EQHGKDPSED TESPGEHDEM 180 NPKMHTALRG KQGVDQAKSN AVGGEPSTEN YLHMRAKRGQ ATSSHSLAER VRRERISERM 240 KLLQELVPGC NKITGKAVML DEIINYVQSL QHQVEFLSMK LATVNPELNV DIDQILSKTI 300 LNSRGGNANT HGINPGLSPS HPFRGFSLGN INGLPGTIQP FHPLPHTLFD SELRSILQTG 360 SGSNPPGQKG TPPNRSDLF |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00135 | DAP | Transfer from AT1G10120 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV54517.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | - | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011074329.1 | 1e-131 | transcription factor bHLH74 | ||||
TrEMBL | A0A2Z7D6B7 | 0.0 | A0A2Z7D6B7_9LAMI; DNA binding protein | ||||
STRING | XP_002510047.1 | 1e-107 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5250 | 24 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 1e-74 | bHLH family protein |