PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV53392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | Dof | ||||||||
Protein Properties | Length: 335aa MW: 35255.5 Da PI: 9.7827 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.1 | 4e-38 | 60 | 120 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprC+s ntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+ KZV53392.1 60 PDAALKCPRCESVNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 120 57899*****************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-31 | 48 | 113 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.0E-32 | 62 | 118 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.171 | 64 | 118 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 66 | 102 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence Send to blast |
MNDMPQQNHQ IIVGSSSTNP LLPPPPQPAQ PAPSHGGGGS GTIRPGSMAE RARMANIPMP 60 DAALKCPRCE SVNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRSVPVG GGCRRNKRSK 120 SVSSKSPASE NRQTATSSAG SISSNSGQEN NILGLTPQLP PLRFMSPLSQ LTDNFNDTMG 180 LNYSGISAPS LLGTGEMNFQ LGSGLFGNGG GNGGIGGGVA SLFASSGGGI IEPWRLQQVQ 240 QFPFLGGGLE PSSPGVYQFH GGEPALALGE TSQSVRPKLS SSMLSQMASV KIEENPGLNL 300 SRQLMGGMPR NDQWNATSAW SDISGFSSFS TSNPL |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00483 | DAP | Transfer from AT5G02460 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV53392.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011095199.1 | 1e-124 | dof zinc finger protein DOF5.1 | ||||
TrEMBL | A0A2Z7D1R0 | 0.0 | A0A2Z7D1R0_9LAMI; Uncharacterized protein | ||||
STRING | VIT_08s0007g00180.t01 | 1e-103 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1917 | 24 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55370.2 | 5e-41 | OBF-binding protein 3 |