PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV53234.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 287aa    MW: 30996.8 Da    PI: 9.3823
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV53234.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.51.5e-383894561
      zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                 +kcprCds ntkfCyynnyslsqPryfCk+CrryWt+GGalrnvPvGgg+rk+k++
  KZV53234.1 38 PRKCPRCDSGNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGALRNVPVGGGCRKSKRT 94
                679***************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-262693IPR003851Zinc finger, Dof-type
PfamPF027019.7E-333993IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.3943993IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104177IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010154Biological Processfruit development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000032Biological Processregulation of secondary shoot formation
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MEKTRTEGDL RQEHDQQQLI PRRLMASENH QEHPAPPPRK CPRCDSGNTK FCYYNNYSLS  60
QPRYFCKSCR RYWTHGGALR NVPVGGGCRK SKRTKPSYAP MSSGEAPRIG SSSPAIITTY  120
NPRGMMSGQS IRSHPLPIPS MSSLYSGGGP FLSSMAAMQS FMQQPTIGTG QGAAMNLAIG  180
SRFRGGGPAG GCGNAAPLPE IYLPSLKPPA PQQFSAQNEL YQSQQSLISP SNPVLNSWTQ  240
TVINSRASPA FWCGGGTGDI TGDHTSGPSM NPNPWSEYDL PGIDPSQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV53234.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096324.21e-68dof zinc finger protein DOF3.1
TrEMBLA0A2Z7D1750.0A0A2Z7D175_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21050.12e-34Dof-type zinc finger domain-containing protein