PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV53208.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 308aa    MW: 34972.7 Da    PI: 6.5427
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV53208.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.22.9e-1524114186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +Wt++ + +L+ea  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++ + ++k+yk +k+   +     +s++p+f ++e
  KZV53208.1  24 CWTEEATWTLVEAWGRRYVELNRGNLRQKDWQEVADVVnashgHTKKSRRTDVQCKNRVDTIKKKYKIEKAKIAESDGAMTSSWPFFPRME 114
                 8**************************************9998889999***********************9999999999********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.8E-2322114No hitNo description
SMARTSM005950.005232121IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MGDLTEFSTL QTLPTRQAPF REDCWTEEAT WTLVEAWGRR YVELNRGNLR QKDWQEVADV  60
VNASHGHTKK SRRTDVQCKN RVDTIKKKYK IEKAKIAESD GAMTSSWPFF PRMEYLIGSN  120
TNKHQNSKFP METAQPTPLL SLPSPPMAVP LSYRTSPSSA MVTPMVLPQK RPMPSPPVDE  180
SYFKRNFSAI AAAAAAADDD IDDGGSEGAE VEGSEGRDIE AEEEGDEAMG RLAKAVERFG  240
QIYEQVEGMK QRQMVELEKQ RMQFAKDLEV QRMQLFMDTQ VQLEKIKRAR RSVSSDGMRH  300
LLICFSLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV53208.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020547001.11e-141trihelix transcription factor ASIL1 isoform X2
TrEMBLA0A2Z7D7I70.0A0A2Z7D7I7_9LAMI; Uncharacterized protein
STRINGMigut.M01037.1.p1e-124(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-30sequence-specific DNA binding transcription factors