PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV52714.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 233aa    MW: 26165.7 Da    PI: 7.8461
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV52714.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.31e-114591354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r+h+e+ErrRR+riN  +++Lr l+P        K++Ka+ L ++++ +k+L
  KZV52714.1 45 RNHSEAERRRRERINGHLATLRGLIPGT-----AKMDKAALLAEVINRVKEL 91
                58*************************6.....5*************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.1614291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-134595IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-94591IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.23E-134698IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-114897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MDVCNNFDGF SDNCFGFQEF SKEVKALVKP ERKLYGAEKA LLALRNHSEA ERRRRERING  60
HLATLRGLIP GTAKMDKAAL LAEVINRVKE LRDRVTEVTR GTLVPTDIDE VKVEQEGKND  120
ENSFFIRASL CCDFKTELLS DIREAIEALP LKTVRAEIAT LGTRMVNVFV IAGCNADEEG  180
SQSLVDSVRK ALRSVLDKFY ASEEFSSRNT MSGKRRRVSL FSSSNSSSYG DLW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15055ERRRRE
2213217KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV52714.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022864707.16e-99transcription factor bHLH30-like
TrEMBLA0A2Z7CZN81e-169A0A2Z7CZN8_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000526225e-86(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA119892123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.19e-36bHLH family protein