PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV51958.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 341aa    MW: 37652.2 Da    PI: 9.4365
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV51958.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.81.1e-3850109261
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                 +++ l+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk++
  KZV51958.1  50 RQQPLNCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRV 109
                 67899*****************************************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-2848108IPR003851Zinc finger, Dof-type
PfamPF027011.9E-3352108IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4554108IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105692IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MLGNCAKKMT ATNQWTMPQD QIIADDQKTF MASTSKGKFM DKASLQDHQR QQPLNCPRCD  60
SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRVR RPSQQASNGG  120
DGISTAYPTA NTSPRIPQQP DLTSAQNHTH SSMFYSLPTD YPGLNFPFAR LSSPRVTSHS  180
HGFDFRLPPI NGLGLGLVPN NEYKDDYNPV KKIVSSSNSS VAIDPIFIGS STFAASTSTM  240
ASLLASSLQR QKYLATGLKD VTPVGSNNFP GLLPFDGMQI PHENGMKERE YRIEGLNRLD  300
WNIYPVDQQI DSTDSASSLL WNAAGSWFDP SNVGSSVPSL I
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV51958.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554179.11e-112LOW QUALITY PROTEIN: dof zinc finger protein DOF1.4-like
TrEMBLA0A2Z7CZ080.0A0A2Z7CZ08_9LAMI; Uncharacterized protein
STRINGXP_002509452.11e-77(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.12e-35Dof family protein