PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

KZV51791.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Dof

Protein Properties

Length: 320aa MW: 34848.9 Da PI: 9.8095

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV51791.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.1	3.4e-37	76	135	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GG lr vPvGgg+r+n++s+ KZV51791.1 76 QSALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGGLRSVPVGGGCRRNRRSK 135 7899*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-25	59	114	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.9E-31	77	133	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.929	79	133	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	81	117	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence Send to blast
MVFSSIPAYN LDPSNWQQPQ NHQIVVGGTI TNPLLPPPQQ PATPPVSSLH GGGGPGAIRP 60 GSMAERARMA NIPVPQSALK CPRCESTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGGLR 120 SVPVGGGCRR NRRSKSASSK SPAGSDRPET SSISTSYNIS SNNSPGGFIP QLRPPRFTFN 180 MKQFPGNFST HDIGLSNYTT GSAASTSDTN NDMNSHIGSI FGRVAASLSS SGGGIEPWRL 240 QHVQQFPVLG GSESSPPEMY EVQDSENVRP RLSSSMLIQM GSVKNEEKLE LKEQLTEGIT 300 PRIKDNQWNL SSEFPQAFIN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV51791.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027069259.1	6e-89	dof zinc finger protein DOF2.4
TrEMBL	A0A2Z7CXS3	0.0	A0A2Z7CXS3_9LAMI; Uncharacterized protein
STRING	VIT_08s0007g00180.t01	5e-78	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1917	24	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	4e-34	DNA binding with one finger 2.4