PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

WRKY

Protein Properties

Length: 346aa MW: 38880.2 Da PI: 7.8285

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV51057.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.9	5.1e-34	196	253	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++Cpvkk+vers +dp++v++tYeg+Hnh+ KZV51057.1 196 EDGYRWRKYGQKAVKNSPYPRSYYRCTTPKCPVKKRVERSFQDPTIVVTTYEGQHNHH 253 8********************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	4.0E-35	180	255	IPR003657	WRKY domain
SuperFamily	SSF118290	1.57E-29	187	255	IPR003657	WRKY domain
PROSITE profile	PS50811	32.305	190	255	IPR003657	WRKY domain
SMART	SM00774	4.5E-39	195	254	IPR003657	WRKY domain
Pfam	PF03106	4.5E-26	196	253	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MSEDLLRDEF YYHQTFHDDL RRNAGGATNF QYSNTTKNAT PPANNSTRAP NSFPADSSGH 60 QRQMLDPRWY LSSTLHGPDF DHNKLSAAGF GTSPLSSSAK EGLRALVVDN LQGLGEVETP 120 VTPNSSISAS STEVAPGEES DSKKNQKLDT DQAKEAAEEG ENMISSRDNK SKKKGEKKQK 180 EPRFAFMTKS EIDQLEDGYR WRKYGQKAVK NSPYPRSYYR CTTPKCPVKK RVERSFQDPT 240 IVVTTYEGQH NHHVPATLRG AAATGMFAPA GSILMTTPPF LQEQQRLLQM PYQLYMNNFS 300 GRNLVYDHHQ EQQLSLSTLI QDHDLHVSGH GLLQDIIPPA FPKREF

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MSEDLLRDEF YYHQTFHDDL RRNAGGATNF QYSNTTKNAT PPANNSTRAP NSFPADSSGH  60
QRQMLDPRWY LSSTLHGPDF DHNKLSAAGF GTSPLSSSAK EGLRALVVDN LQGLGEVETP  120
VTPNSSISAS STEVAPGEES DSKKNQKLDT DQAKEAAEEG ENMISSRDNK SKKKGEKKQK  180
EPRFAFMTKS EIDQLEDGYR WRKYGQKAVK NSPYPRSYYR CTTPKCPVKK RVERSFQDPT  240
IVVTTYEGQH NHHVPATLRG AAATGMFAPA GSILMTTPPF LQEQQRLLQM PYQLYMNNFS  300
GRNLVYDHHQ EQQLSLSTLI QDHDLHVSGH GLLQDIIPPA FPKREF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wj2_A	9e-31	185	256	7	78	Probable WRKY transcription factor 4
2lex_A	9e-31	185	256	7	78	Probable WRKY transcription factor 4
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Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00440	DAP	Transfer from AT4G18170	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV51057.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022879638.1	3e-93	probable WRKY transcription factor 71
TrEMBL	A0A2Z7CYH6	0.0	A0A2Z7CYH6_9LAMI; WRKY transcription factor
STRING	XP_002519733.1	8e-70	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1485	24	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	2e-52	WRKY DNA-binding protein 71