PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV50468.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 382aa    MW: 42288.5 Da    PI: 7.5014
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV50468.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.3e-09200247455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  KZV50468.1 200 SHSLAERVRREKISERMKYLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 247
                 8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.85E-10194251No hitNo description
SuperFamilySSF474592.62E-17194265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.0E-18196264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.624196246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-6200247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-10202252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MFAGNAEMSV LERQRARLNW QQESLIQHQP FAFFSENEHF VGDFLMGNGD QGFSELLLGR  60
AMKPNPGFED GWQGLNYGNG SEFCPLPRTS ISPPAMAATN AGKAALSSAT GKESFKKRKA  120
DRNHIPKAAA EERSQDKKMK GCAEEDTKLT EQNSNSKSTI TTANDNNNNK GTSDQKLKPS  180
EAPKQDYIHV RARRGQATDS HSLAERVRRE KISERMKYLQ DLVPGCNKVT GKAGMLDEII  240
NYVQSLQRQV EFLSMKLAAM NPRLDFETDN YLAKEMFQVC ASSIPAIGPS SESVNPTHLQ  300
FNGLGQGVLS RGLEMGANPP DVALRRTISA PVSILDTLLD SSCLNQIQPL TWDTELQNLY  360
GMDYQQGRST SFVSQPFTGI RL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV50468.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551514.11e-159transcription factor bHLH63 isoform X1
TrEMBLA0A2Z7CUQ20.0A0A2Z7CUQ2_9LAMI; Uncharacterized protein
STRINGXP_008236908.11e-131(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA65382330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.14e-65cryptochrome-interacting basic-helix-loop-helix 1