PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV50275.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 337aa    MW: 37615.2 Da    PI: 6.121
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV50275.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08190237455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN ++  L+el+P +   + k    a++L + +++++ Lq
  KZV50275.1 190 SHSLAERARREKINARMKLLQELVPGC---N-KVSWTAMVLDEIINHVQALQ 237
                 8*************************9...4.33556999999999999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-14184254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.49E-9184241No hitNo description
PROSITE profilePS5088813.929186236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.0E-15187252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-6190237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-8192242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MEPPVEETRV QFRSGIRGSN PEEMSFGFLP AHEVVSTQTP SENGGSSFTA LLELPPPQAV  60
ELLVNEDFRA RTAPPIFPSN TVLVDRASKF SVFATAVNSP EVKSVLSASC SMKPDMVKLE  120
PMDSDSHLNS SMPAASDQSP KSLKRKEKEK KVNETNKKSK KVVPNDISEG SGDKLPYIHV  180
RARRGEATDS HSLAERARRE KINARMKLLQ ELVPGCNKVS WTAMVLDEII NHVQALQRQV  240
EFLSMRLAAV NPRNNINLDA FFAEESEPAV DNYHSMFTAS MWPERQVSGS RQQYQQLWHL  300
EGHQQPIWAR EEDNSNFITT ENSLLTFDSS SNSGAMS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV50275.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078863.11e-154transcription factor bHLH48
SwissprotQ8VZ026e-72BH048_ARATH; Transcription factor bHLH48
TrEMBLA0A2Z7CV950.0A0A2Z7CV95_9LAMI; Uncharacterized protein
STRINGMigut.K00063.1.p1e-131(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40292342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.22e-72bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Li Y,Wang H,Li X,Liang G,Yu D
    Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana.
    J. Exp. Bot., 2017. 68(11): p. 2757-2767
    [PMID:28591805]