PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV48531.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ARR-B
Protein Properties Length: 442aa    MW: 49281.2 Da    PI: 5.1155
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV48531.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like65.69.1e-21209258555
     G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +Wt+eLHe+Fve+v++L G  +  P+ ile+m+v+gLt+ +v+SHLQk R 
  KZV48531.1 209 EWTQELHEKFVEVVKEL-GDGRCFPRDILEAMNVPGLTRMQVASHLQKCRQ 258
                 7****************.9*****************************995 PP
2Response_reg25.19.1e-102611814107
                   HHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS
  Response_reg  14 lrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107
                    r++le   y ev++++ +  a  ll +++  +D++++D++ ++++G++l+    + +    +i+++++ ++++++ a++ Ga  f+ Kp  +e l
    KZV48531.1  26 TRKLLEFNSY-EVTAVSVAAVASSLLAKEKgkYDVVMVDVSPSDVQGFQLAHDAINLG--YTVILMSDNPNPTLVKCAIEDGAFMFIQKPATMEVL 118
                   5778887888.888888888888888666667*******************9876655..89****************************777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.9E-1511140No hitNo description
PROSITE profilePS5011019.14112126IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521721.34E-1312163IPR011006CheY-like superfamily
PfamPF000722.5E-625118IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5129412.46202261IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-19205259IPR009057Homeodomain-like
SuperFamilySSF466894.66E-14209261IPR009057Homeodomain-like
PfamPF002497.1E-8209256IPR001005SANT/Myb domain
TIGRFAMsTIGR015571.2E-17209258IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MAFFHANMIE VHVLLFGNDM VSLLDTRKLL EFNSYEVTAV SVAAVASSLL AKEKGKYDVV  60
MVDVSPSDVQ GFQLAHDAIN LGYTVILMSD NPNPTLVKCA IEDGAFMFIQ KPATMEVLKY  120
LWQHVLRENT RKSKESARFR EMVSTIESSN FILNSGQNMI HPSTIEANVN LHEFGSRNVV  180
HRNGLEGFMF GPEDENLEYR GKKPKICTEW TQELHEKFVE VVKELGDGRC FPRDILEAMN  240
VPGLTRMQVA SHLQKCRQGL KAAHEEGQQN GSSVSSTSNG PNYHSKPKRR GSYPRIAKGA  300
QPKFLVRNKE KDEQAATTKP VEDSIGSVEP ENMKQNIVIS DNASNKSVNV TGISCGHTNG  360
EVVVESNHEG WTIPFDDSFD FAIDNSYGIN VMDYNFEGFG VDQTFSQAGV DQTFSQLISS  420
ASDEEPGSFW RSFFSNFSSE QD
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV48531.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7CN600.0A0A2Z7CN60_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.26e-23response regulator 1