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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KZV48422.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family |
DBB |
Protein Properties |
Length: 246aa MW: 27063.9 Da PI: 6.2272 |
Description |
DBB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KZV48422.1 | genome | CNU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 17.5 | 8.8e-06 | 4 | 46 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
C+ +e e++ C ++ lC C ++ H H++v
KZV48422.1 4 QCSVCETAEAKVLCCADEAALCWGCDQKVHAAnklagkHQRVL 46
7******99*********************6678888888775 PP
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2 | zf-B_box | 24.8 | 4.4e-08 | 55 | 97 | 2 | 38 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
e +kC+ ++e +fC +++ llC++C ++H+ H+
KZV48422.1 55 ETPKCDICQEIAGYFFCLEDRALLCRKCDAAIHSTnalvclHQ 97
6789******88*********************6566666665 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MKIQCSVCET AEAKVLCCAD EAALCWGCDQ KVHAANKLAG KHQRVLLSSS STSSETPKCD 60 ICQEIAGYFF CLEDRALLCR KCDAAIHSTN ALVCLHQRFL LTGVKLAPES PTLPKPTTPM 120 PSTTVVGTDF TQWPLDEILK FDGGFNQNAT LLLSKANSEK LGDPICSRPV EGSLEANECV 180 DQMPETFWAV PQITSQLTES ELHLSKSYLN PSNCATFVPD VISPWFQISR PHQEPQGTGS 240 KRRRQF
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Functional Description ? help
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Source |
Description |
UniProt | Acts as positive regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation, independently and in concert with HY5 and BBX21 (PubMed:18540109, PubMed:18796637, PubMed:18182030, PubMed:21427283). Acts as a positive regulator of de-etiolation and influences chloroplast biogenesis and function through regulation of genes encoding chloroplast proteins (PubMed:18182030). Acts downstream of COP1 and plays an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). Regulates the expression of genes responsive to light hormone signals which may contribute to optimal seedling development (PubMed:21427283). {ECO:0000269|PubMed:18182030, ECO:0000269|PubMed:18540109, ECO:0000269|PubMed:18796637, ECO:0000269|PubMed:21070414, ECO:0000269|PubMed:21427283}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. {ECO:0000269|PubMed:18182030}. |